A practical guide to pseudo-marginal methods for computational inference in systems biology
For many stochastic models of interest in systems biology, such as those describing
biochemical reaction networks, exact quantification of parameter uncertainty through …
biochemical reaction networks, exact quantification of parameter uncertainty through …
A multifidelity ensemble Kalman filter with reduced order control variates
This work develops a new multifidelity ensemble Kalman filter (MFEnKF) algorithm based on
a linear control variate framework. The approach allows for rigorous multifidelity extensions …
a linear control variate framework. The approach allows for rigorous multifidelity extensions …
Multilevel ensemble Kalman filtering
This work embeds a multilevel Monte Carlo sampling strategy into the Monte Carlo step of
the ensemble Kalman filter (EnKF) in the setting of finite dimensional signal evolution and …
the ensemble Kalman filter (EnKF) in the setting of finite dimensional signal evolution and …
Multilevel particle filters
In this paper the filtering of partially observed diffusions, with discrete-time observations, is
considered. It is assumed that only biased approximations of the diffusion can be obtained …
considered. It is assumed that only biased approximations of the diffusion can be obtained …
Advanced multilevel monte carlo methods
This article reviews the application of some advanced Monte Carlo techniques in the context
of multilevel Monte Carlo (MLMC). MLMC is a strategy employed to compute expectations …
of multilevel Monte Carlo (MLMC). MLMC is a strategy employed to compute expectations …
Multilevel markov chain monte carlo
In this paper we address the problem of the prohibitively large computational cost of existing
Markov chain Monte Carlo methods for large-scale applications with high-dimensional …
Markov chain Monte Carlo methods for large-scale applications with high-dimensional …
Multilevel sequential Monte Carlo with dimension-independent likelihood-informed proposals
In this article we develop a new sequential Monte Carlo method for multilevel Monte Carlo
estimation. In particular, the method can be used to estimate expectations with respect to a …
estimation. In particular, the method can be used to estimate expectations with respect to a …
Multilevel ensemble Kalman filtering for spatio-temporal processes
We design and analyse the performance of a multilevel ensemble Kalman filter method
(MLEnKF) for filtering settings where the underlying state-space model is an infinite …
(MLEnKF) for filtering settings where the underlying state-space model is an infinite …
Multilevel ensemble Kalman filtering based on a sample average of independent EnKF estimators
We introduce a new multilevel ensemble Kalman filter method (MLEnKF) which consists of a
hierarchy of independent samples of ensemble Kalman filters (EnKF). This new MLEnKF …
hierarchy of independent samples of ensemble Kalman filters (EnKF). This new MLEnKF …
A multi-fidelity ensemble kalman filter with hyperreduced reduced-order models
G Donoghue, M Yano - Computer Methods in Applied Mechanics and …, 2022 - Elsevier
We present an efficient data assimilation framework for nonlinear dynamical systems that
uses multi-fidelity statistical estimates based on a full-order model and a projection-based …
uses multi-fidelity statistical estimates based on a full-order model and a projection-based …