Theoretical methods for the description of the solvent effect in biomolecular systems
The environment plays a key role in the determination of the properties and reactivity of
substances in condensed phases. The complexity of chemical phenomena in solution has …
substances in condensed phases. The complexity of chemical phenomena in solution has …
Methods for molecular mechanics modeling of coordination compounds
BP Hay - Coordination chemistry reviews, 1993 - Elsevier
This review focuses on the development of molecular mechanics (MM) models for molecules
found in coordination chemistry, primarily the complexes of a single metal ion with organic …
found in coordination chemistry, primarily the complexes of a single metal ion with organic …
Molecular electrostatics
G Naray-Szabo, GG Ferenczy - Chemical reviews, 1995 - ACS Publications
In principle, quantum mechanicsdescribes molec-ular interactions with sufficient accuracy
but at the cost of extremely complicated and time-consuming numerical calculations …
but at the cost of extremely complicated and time-consuming numerical calculations …
Quantum mechanical computations on very large molecular systems: The local self‐consistent field method
V Théry, D Rinaldi, JL Rivail, B Maigret… - Journal of …, 1994 - Wiley Online Library
Quantum chemical computations on a subset of a large molecule can be performed, at the
neglect of diatomic differential overlap (NDDO) level, without further approximation provided …
neglect of diatomic differential overlap (NDDO) level, without further approximation provided …
Self-organizing molecular field analysis: A tool for structure− activity studies
DD Robinson, PJ Winn, PD Lyne… - Journal of medicinal …, 1999 - ACS Publications
Self-organizing molecular field analysis (SOMFA) is a novel technique for three-dimensional
quantitative structure− activity relations (3D-QSAR). It is simple and intuitive in concept and …
quantitative structure− activity relations (3D-QSAR). It is simple and intuitive in concept and …
Atomic charges for variable molecular conformations
CA Reynolds, JW Essex… - Journal of the American …, 1992 - ACS Publications
The problem of generating high-quality atomic charges valid over a range of conformations
has been addressed using two related methods which both employ a constrained …
has been addressed using two related methods which both employ a constrained …
Stacking interactions and intercalative DNA binding
F Gago - Methods, 1998 - Elsevier
The DNA-binding properties of many ligands can be rationalized on the basis of their
structural and electronic complementarity with the functional groups present in the minor and …
structural and electronic complementarity with the functional groups present in the minor and …
Solvation in octanol: parametrization of the continuum MST model
This study reports the parametrization of the HF/6‐31G (d) version of the MST continuum
model for n‐octanol. Following our previous studies related to the MST parametrization for …
model for n‐octanol. Following our previous studies related to the MST parametrization for …
Structure-activity relationships from molecular similarity matrices
AC Good, SS So, WG Richards - Journal of Medicinal Chemistry, 1993 - ACS Publications
It is generally thought that noncovalent forces dominate receptor-drug interactions, and that
these forces can be described in terms of steric and electrostatic effects. In an attempt to …
these forces can be described in terms of steric and electrostatic effects. In an attempt to …
Solvent effects in chloroform solution: Parametrization of the MST/SCRF continuum model
The suitability of the self-consistent reaction field (SCRF) strategy for the study of solutes in
chloroform solution has been examined. The SCRF method developed by Miertus, Scrocco …
chloroform solution has been examined. The SCRF method developed by Miertus, Scrocco …