[HTML][HTML] Enhancing the rate of genetic gain in public-sector plant breeding programs: lessons from the breeder's equation

JN Cobb, RU Juma, PS Biswas, JD Arbelaez… - Theoretical and applied …, 2019 - Springer
Key message The integration of new technologies into public plant breeding programs can
make a powerful step change in agricultural productivity when aligned with principles of …

Genomic selection: genome-wide prediction in plant improvement

ZA Desta, R Ortiz - Trends in plant science, 2014 - cell.com
Association analysis is used to measure relations between markers and quantitative trait loci
(QTL). Their estimation ignores genes with small effects that trigger underpinning …

[HTML][HTML] Genomic selection in the era of next generation sequencing for complex traits in plant breeding

JA Bhat, S Ali, RK Salgotra, ZA Mir, S Dutta… - Frontiers in …, 2016 - frontiersin.org
Genomic selection (GS) is a promising approach exploiting molecular genetic markers to
design novel breeding programs and to develop new markers-based models for genetic …

[HTML][HTML] Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number …

J Spindel, H Begum, D Akdemir, P Virk, B Collard… - PLoS …, 2015 - journals.plos.org
Genomic Selection (GS) is a new breeding method in which genome-wide markers are used
to predict the breeding value of individuals in a breeding population. GS has been shown to …

[HTML][HTML] Breeding schemes for the implementation of genomic selection in wheat (Triticum spp.)

FM Bassi, AR Bentley, G Charmet, R Ortiz, J Crossa - Plant Science, 2016 - Elsevier
In the last decade the breeding technology referred to as 'genomic selection'(GS) has been
implemented in a variety of species, with particular success in animal breeding. Recent …

[HTML][HTML] Training set optimization under population structure in genomic selection

J Isidro, JL Jannink, D Akdemir, J Poland… - Theoretical and applied …, 2015 - Springer
Key message Population structure must be evaluated before optimization of the training set
population. Maximizing the phenotypic variance captured by the training set is important for …

[PDF][PDF] Enhancing genetic gain through genomic selection: from livestock to plants

Y Xu, X Liu, J Fu, H Wang, J Wang, C Huang… - Plant …, 2020 - cell.com
Although long-term genetic gain has been achieved through increasing use of modern
breeding methods and technologies, the rate of genetic gain needs to be accelerated to …

Haploids: constraints and opportunities in plant breeding

SL Dwivedi, AB Britt, L Tripathi, S Sharma… - Biotechnology …, 2015 - Elsevier
The discovery of haploids in higher plants led to the use of doubled haploid (DH) technology
in plant breeding. This article provides the state of the art on DH technology including the …

Modeling epistasis in genomic selection

Y Jiang, JC Reif - Genetics, 2015 - academic.oup.com
Modeling epistasis in genomic selection is impeded by a high computational load. The
extended genomic best linear unbiased prediction (EG-BLUP) with an epistatic relationship …

Perspectives for genomic selection applications and research in plants

N Heslot, JL Jannink, ME Sorrells - Crop Science, 2015 - Wiley Online Library
Genomic selection (GS) has created a lot of excitement and expectations in the animal‐and
plant‐breeding research communities. In this review, we briefly describe how genomic …