Personalized early detection and prevention of breast cancer: ENVISION consensus statement

N Pashayan, AC Antoniou, U Ivanus… - Nature reviews Clinical …, 2020 - nature.com
Abstract The European Collaborative on Personalized Early Detection and Prevention of
Breast Cancer (ENVISION) brings together several international research consortia working …

Variants of uncertain significance in the era of high-throughput genome sequencing: a lesson from breast and ovary cancers

G Federici, S Soddu - Journal of Experimental & Clinical Cancer Research, 2020 - Springer
The promising expectations about personalized medicine have opened the path to routine
large-scale sequencing and increased the importance of genetic counseling for hereditary …

Expanding ACMG variant classification guidelines into a general framework

E Masson, WB Zou, E Génin, DN Cooper, G Le Gac… - Human Genomics, 2022 - Springer
Abstract Background The American College of Medical Genetics and Genomics (ACMG)-
recommended five variant classification categories (pathogenic, likely pathogenic, uncertain …

Evidence-based recommendations for gene-specific ACMG/AMP variant classification from the ClinGen ENIGMA BRCA1 and BRCA2 Variant Curation Expert Panel

MT Parsons, M de la Hoya, ME Richardson… - The American Journal of …, 2024 - cell.com
The ENIGMA research consortium develops and applies methods to determine clinical
significance of variants in hereditary breast and ovarian cancer genes. An ENIGMA …

Saturation genome editing of 11 codons and exon 13 of BRCA2 coupled with chemotherapeutic drug response accurately determines pathogenicity of variants

S Sahu, TL Sullivan, AY Mitrophanov, M Galloux… - Plos …, 2023 - journals.plos.org
The unknown pathogenicity of a significant number of variants found in cancer-related
genes is attributed to limited epidemiological data, resulting in their classification as variant …

Stepwise ABC system for classification of any type of genetic variant

G Houge, A Laner, S Cirak, N de Leeuw… - European Journal of …, 2022 - nature.com
Abstract The American College of Medical Genetics and Genomics a nd the Association for
Molecular Pathology (ACMG-AMP) system for variant classification is score based with five …

Co-observation of germline pathogenic variants in breast cancer predisposition genes: Results from analysis of the BRIDGES sequencing dataset

AL Davidson, K Michailidou, MT Parsons… - The American Journal of …, 2024 - cell.com
Co-observation of a gene variant with a pathogenic variant in another gene that explains the
disease presentation has been designated as evidence against pathogenicity for commonly …

[HTML][HTML] CHEK2 variants: linking functional impact to cancer risk

RACM Boonen, MPG Vreeswijk, H van Attikum - Trends in cancer, 2022 - cell.com
Protein-truncating variants in the breast cancer susceptibility gene CHEK2 are associated
with a moderately increased risk of breast cancer. By contrast, for missense variants of …

CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods

Genome biology, 2024 - Springer
Abstract Background The Critical Assessment of Genome Interpretation (CAGI) aims to
advance the state-of-the-art for computational prediction of genetic variant impact …

[HTML][HTML] Strong functional data for pathogenicity or neutrality classify BRCA2 DNA-binding-domain variants of uncertain significance

ME Richardson, C Hu, KY Lee, H LaDuca… - The American Journal of …, 2021 - cell.com
Determination of the clinical relevance of rare germline variants of uncertain significance
(VUSs) in the BRCA2 cancer predisposition gene remains a challenge as a result of limited …