The many faces of lysine acylation in proteins: Phytohormones as unexplored substrates

N Balbinott, R Margis - Plant Science, 2023 - Elsevier
Protein post-translational modification (PTM) is a ubiquitousprocess thatoccurs in most
proteins. Lysine residues containing an ε-amino group are recognized as hotspots for the …

Consequences of genetic recombination on protein folding stability

R Del Amparo, LD González-Vázquez… - Journal of Molecular …, 2023 - Springer
Genetic recombination is a common evolutionary mechanism that produces molecular
diversity. However, its consequences on protein folding stability have not attracted the same …

Persistent homology reveals strong phylogenetic signal in 3D protein structures

L Bou Dagher, D Madern, P Malbos… - PNAS …, 2024 - academic.oup.com
Abstract Changes that occur in proteins over time provide a phylogenetic signal that can be
used to decipher their evolutionary history and the relationships between organisms …

Pathogenicity Prediction of GABAA Receptor Missense Variants

YJ Wang, GH Vu, TW Mu - Israel Journal of Chemistry, 2024 - Wiley Online Library
Variants in the genes encoding gamma‐aminobutyric acid type A (GABAA) receptor
subunits are associated with epilepsy. To date, over 1000 clinical variants have been …

RoseNet: Predicting Energy Metrics of Double InDel Mutants Using Deep Learning

S Coffland, K Christensen, F Jagodzinski… - Proceedings of the 14th …, 2023 - dl.acm.org
An amino acid insertion or deletion, or InDel, can have profound and varying functional
impacts on a protein's structure. InDel mutations in the transmembrane conductor regulator …

Special Issue “Protein Modeling and Simulation: Selected Articles from the Computational Structural Bioinformatics Workshop 2021”

N Forouzesh, K Al Nasr - Biomolecules, 2023 - mdpi.com
Computational structural biology has demonstrated a key role in improving human health.
By harnessing big data techniques and machine learning methods, computational structural …

Identifying Impactful Pairs of Insertion Mutations in Proteins

C Li, F Jagodzinski - Proceedings of the 14th ACM International …, 2023 - dl.acm.org
Understanding how amino acid insertion or deletion (InDel) mutations affect a protein's
structure can inform pharmaceutical efforts targeting diseases that are caused by protein …

The Influence of Allostery Governing the Changes in Protein Dynamics Upon Substitution

J Hess - 2023 - tigerprints.clemson.edu
The focus of this research is to investigate the effects of allostery on the function/activity of an
enzyme, human immunodeficiency virus type 1 (HIV-1) protease, using well-defined …

[引用][C] Use of gut binding peptides as artificial anchors for bacterial pesticidal proteins

CDS Tavares, R Mishra, BC Bonning - 2023 - Elsevier