[HTML][HTML] Advances and trends in omics technology development
X Dai, L Shen - Frontiers in Medicine, 2022 - frontiersin.org
The human history has witnessed the rapid development of technologies such as high-
throughput sequencing and mass spectrometry that led to the concept of 'omics' and …
throughput sequencing and mass spectrometry that led to the concept of 'omics' and …
Protein interaction networks in neurodegenerative diseases: From physiological function to aggregation
G Calabrese, C Molzahn, T Mayor - Journal of Biological Chemistry, 2022 - ASBMB
The accumulation of protein inclusions is linked to many neurodegenerative diseases that
typically develop in older individuals, due to a combination of genetic and environmental …
typically develop in older individuals, due to a combination of genetic and environmental …
PaxDb 5.0: curated protein quantification data suggests adaptive proteome changes in yeasts
Abstract The" Protein Abundances Across Organisms" database (PaxDb) is an integrative
metaresource dedicated to protein abundance levels, in tissue-specific or whole-organism …
metaresource dedicated to protein abundance levels, in tissue-specific or whole-organism …
Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery
Co-fractionation/mass spectrometry (CF/MS) enables the mapping of endogenous
macromolecular networks on a proteome scale, but current methods are experimentally …
macromolecular networks on a proteome scale, but current methods are experimentally …
Omics in systems biology: current progress and future outlook
TD Veenstra - Proteomics, 2021 - Wiley Online Library
Biological research has undergone tremendous changes over the past three decades.
Research used to almost exclusively focus on a single aspect of a single molecule per …
Research used to almost exclusively focus on a single aspect of a single molecule per …
DIP-MS: ultra-deep interaction proteomics for the deconvolution of protein complexes
Most proteins are organized in macromolecular assemblies, which represent key functional
units regulating and catalyzing most cellular processes. Affinity purification of the protein of …
units regulating and catalyzing most cellular processes. Affinity purification of the protein of …
Meta-analysis defines principles for the design and analysis of co-fractionation mass spectrometry experiments
MA Skinnider, LJ Foster - Nature Methods, 2021 - nature.com
Co-fractionation mass spectrometry (CF-MS) has emerged as a powerful technique for
interactome mapping. However, there is little consensus on optimal strategies for the design …
interactome mapping. However, there is little consensus on optimal strategies for the design …
PCprophet: a framework for protein complex prediction and differential analysis using proteomic data
Despite the availability of methods for analyzing protein complexes, systematic analysis of
complexes under multiple conditions remains challenging. Approaches based on …
complexes under multiple conditions remains challenging. Approaches based on …
A genome-wide association study of tinnitus reveals shared genetic links to neuropsychiatric disorders
Tinnitus, a phantom perception of sound in the absence of any external sound source, is a
prevalent health condition often accompanied by psychiatric comorbidities. Recent genome …
prevalent health condition often accompanied by psychiatric comorbidities. Recent genome …
[HTML][HTML] Iron-sulfur cluster biogenesis, trafficking, and signaling: Roles for CGFS glutaredoxins and BolA proteins
EA Talib, CE Outten - Biochimica et Biophysica Acta (BBA)-Molecular Cell …, 2021 - Elsevier
The synthesis and trafficking of iron-sulfur (Fe-S) clusters in both prokaryotes and
eukaryotes requires coordination within an expanding network of proteins that function in the …
eukaryotes requires coordination within an expanding network of proteins that function in the …