Chloroplast genomes: diversity, evolution, and applications in genetic engineering
Chloroplasts play a crucial role in sustaining life on earth. The availability of over 800
sequenced chloroplast genomes from a variety of land plants has enhanced our …
sequenced chloroplast genomes from a variety of land plants has enhanced our …
GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes
GetOrganelle is a state-of-the-art toolkit to accurately assemble organelle genomes from
whole genome sequencing data. It recruits organelle-associated reads using a modified …
whole genome sequencing data. It recruits organelle-associated reads using a modified …
Plastid RNA polymerases: orchestration of enzymes with different evolutionary origins controls chloroplast biogenesis during the plant life cycle
T Pfannschmidt, R Blanvillain… - Journal of …, 2015 - academic.oup.com
Chloroplasts are the sunlight-collecting organelles of photosynthetic eukaryotes that
energetically drive the biosphere of our planet. They are the base for all major food webs by …
energetically drive the biosphere of our planet. They are the base for all major food webs by …
GetOrganelle: a simple and fast pipeline for de novo assembly of a complete circular chloroplast genome using genome skimming data
Background: Chloroplast genes and genomes are the most important genomic data for plant
phylogeny and DNA barcoding. Since the rapid development of high throughput sequencing …
phylogeny and DNA barcoding. Since the rapid development of high throughput sequencing …
Comparative and phylogenetic analyses of six Kenya Polystachya (Orchidaceae) species based on the complete chloroplast genome sequences
H Jiang, J Tian, J Yang, X Dong, Z Zhong… - BMC Plant …, 2022 - Springer
Abstract Background Polystachya Hook. is a large pantropical orchid genus (c. 240 species)
distributed in Africa, southern Asia and the Americas, with the center of diversity in Africa …
distributed in Africa, southern Asia and the Americas, with the center of diversity in Africa …
Comparative Analysis of the Complete Chloroplast Genomes of Five Quercus Species
Y Yang, T Zhou, D Duan, J Yang, L Feng… - Frontiers in plant …, 2016 - frontiersin.org
Quercus is considered economically and ecologically one of the most important genera in
the Northern Hemisphere. Oaks are taxonomically perplexing because of shared …
the Northern Hemisphere. Oaks are taxonomically perplexing because of shared …
Comparative analysis of the complete chloroplast genome among Prunus mume, P. armeniaca, and P. salicina
Abstract Prunus mume Sieb. et Zucc., P. armeniaca L., and P. salicina L. are economically
important fruit trees in temperate regions. These species are taxonomically perplexing …
important fruit trees in temperate regions. These species are taxonomically perplexing …
The Complete Chloroplast Genome Sequences of Five Epimedium Species: Lights into Phylogenetic and Taxonomic Analyses
Epimedium L. is a phylogenetically and economically important genus in the family
Berberidaceae. We here sequenced the complete chloroplast (cp) genomes of four …
Berberidaceae. We here sequenced the complete chloroplast (cp) genomes of four …
[HTML][HTML] Incongruence between gene trees and species trees and phylogenetic signal variation in plastid genes
The current classification of angiosperms is based primarily on concatenated plastid
markers and maximum likelihood (ML) inference. This approach has been justified by the …
markers and maximum likelihood (ML) inference. This approach has been justified by the …
Phylogenomic approaches untangle early divergences and complex diversifications of the olive plant family
Background Deep-branching phylogenetic relationships are often difficult to resolve
because phylogenetic signals are obscured by the long history and complexity of …
because phylogenetic signals are obscured by the long history and complexity of …