Runs of homozygosity: current knowledge and applications in livestock
E Peripolli, DP Munari, M Silva, ALF Lima… - Animal …, 2017 - Wiley Online Library
This review presents a broader approach to the implementation and study of runs of
homozygosity (ROH) in animal populations, focusing on identifying and characterizing ROH …
homozygosity (ROH) in animal populations, focusing on identifying and characterizing ROH …
The transition period updated: A review of the new insights into the adaptation of dairy cows to the new lactation
M Mezzetti, L Cattaneo, MM Passamonti, V Lopreiato… - Dairy, 2021 - mdpi.com
Recent research on the transition period (TP) of dairy cows has highlighted the pivotal role
of immune function in affecting the severity of metabolic challenges the animals face when …
of immune function in affecting the severity of metabolic challenges the animals face when …
The distribution of runs of homozygosity and selection signatures in six commercial meat sheep breeds
Domestication and the subsequent selection of animals for either economic or
morphological features can leave a variety of imprints on the genome of a population …
morphological features can leave a variety of imprints on the genome of a population …
Inbreeding and runs of homozygosity before and after genomic selection in North American Holstein cattle
Background While autozygosity as a consequence of selection is well understood, there is
limited information on the ability of different methods to measure true inbreeding. In the …
limited information on the ability of different methods to measure true inbreeding. In the …
Detect runs of homozygosity and runs of heterozygosity in diploid genomes
detectRUNS is a R package for the detection of runs of homozygosity (ROH/ROHom) and of
heterozygosity (ROHet, aka “heterozygosity-rich regions”) in diploid genomes. ROH/ROHom …
heterozygosity (ROHet, aka “heterozygosity-rich regions”) in diploid genomes. ROH/ROHom …
Genetic diversity and signatures of selection in various goat breeds revealed by genome-wide SNP markers
Background The detection of signatures of selection has the potential to elucidate the
identities of genes and mutations associated with phenotypic traits important for livestock …
identities of genes and mutations associated with phenotypic traits important for livestock …
Estimation of inbreeding using pedigree, 50k SNP chip genotypes and full sequence data in three cattle breeds
Background Levels of inbreeding in cattle populations have increased in the past due to the
use of a limited number of bulls for artificial insemination. High levels of inbreeding lead to …
use of a limited number of bulls for artificial insemination. High levels of inbreeding lead to …
Genomic inbreeding estimation in small populations: evaluation of runs of homozygosity in three local dairy cattle breeds
In the local breeds with small population size, one of the most important problems is the
increase of inbreeding coefficient (F). High levels of inbreeding lead to reduced genetic …
increase of inbreeding coefficient (F). High levels of inbreeding lead to reduced genetic …
Assessment of runs of homozygosity islands and estimates of genomic inbreeding in Gyr (Bos indicus) dairy cattle
E Peripolli, NB Stafuzza, DP Munari, ALF Lima… - BMC genomics, 2018 - Springer
Background Runs of homozygosity (ROH) are continuous homozygous segments of the
DNA sequence. They have been applied to quantify individual autozygosity and used as a …
DNA sequence. They have been applied to quantify individual autozygosity and used as a …
[HTML][HTML] 基于SNP 芯片的丫杈猪保种群体遗传结构研究
陶璇, 杨雪梅, 梁艳, 刘一辉, 汪勇, 孔繁晶, 雷云峰… - 畜牧兽医学报, 2023 - html.rhhz.net
旨在研究丫杈猪保种群体的遗传多样性, 亲缘关系和家系结构. 本研究采用“中芯一号”
芯片检测了166 头丫杈种猪的单核苷酸多态性(single nucleotide polymorphism, SNP); …
芯片检测了166 头丫杈种猪的单核苷酸多态性(single nucleotide polymorphism, SNP); …