Linking plant secondary metabolites and plant microbiomes: a review
Z Pang, J Chen, T Wang, C Gao, Z Li, L Guo… - Frontiers in plant …, 2021 - frontiersin.org
Plant secondary metabolites (PSMs) play many roles including defense against pathogens,
pests, and herbivores; response to environmental stresses, and mediating organismal …
pests, and herbivores; response to environmental stresses, and mediating organismal …
Correlation and association analyses in microbiome study integrating multiomics in health and disease
Y Xia - Progress in molecular biology and translational …, 2020 - Elsevier
Correlation and association analyses are one of the most widely used statistical methods in
research fields, including microbiome and integrative multiomics studies. Correlation and …
research fields, including microbiome and integrative multiomics studies. Correlation and …
Predictive metabolomic profiling of microbial communities using amplicon or metagenomic sequences
Microbial community metabolomics, particularly in the human gut, are beginning to provide a
new route to identify functions and ecology disrupted in disease. However, these data can …
new route to identify functions and ecology disrupted in disease. However, these data can …
The potential of genomics for restoring ecosystems and biodiversity
Billions of hectares of natural ecosystems have been degraded through human actions. The
global community has agreed on targets to halt and reverse these declines, and the …
global community has agreed on targets to halt and reverse these declines, and the …
Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill
Abstract The Deepwater Horizon (DWH) oil spill in the spring of 2010 resulted in an input
of∼ 4.1 million barrels of oil to the Gulf of Mexico;> 22% of this oil is unaccounted for, with …
of∼ 4.1 million barrels of oil to the Gulf of Mexico;> 22% of this oil is unaccounted for, with …
Computational meta'omics for microbial community studies
Complex microbial communities are an integral part of the Earth's ecosystem and of our
bodies in health and disease. In the last two decades, culture‐independent approaches …
bodies in health and disease. In the last two decades, culture‐independent approaches …
Wine microbiome: a dynamic world of microbial interactions
Y Liu, S Rousseaux, R Tourdot-Maréchal… - Critical reviews in …, 2017 - Taylor & Francis
Most fermented products are generated by a mixture of microbes. These microbial consortia
perform various biological activities responsible for the nutritional, hygienic, and aromatic …
perform various biological activities responsible for the nutritional, hygienic, and aromatic …
Metabolic model-based integration of microbiome taxonomic and metabolomic profiles elucidates mechanistic links between ecological and metabolic variation
Multiple molecular assays now enable high-throughput profiling of the ecology, metabolic
capacity, and activity of the human microbiome. However, to date, analyses of such multi …
capacity, and activity of the human microbiome. However, to date, analyses of such multi …
The ocean sampling day consortium
A Kopf, M Bicak, R Kottmann, J Schnetzer, I Kostadinov… - Gigascience, 2015 - Springer
Abstract Ocean Sampling Day was initiated by the EU-funded Micro B3 (Marine Microbial
Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine …
Biodiversity, Bioinformatics, Biotechnology) project to obtain a snapshot of the marine …
Multi-omic meta-analysis identifies functional signatures of airway microbiome in chronic obstructive pulmonary disease
Z Wang, Y Yang, Z Yan, H Liu, B Chen… - The ISME …, 2020 - academic.oup.com
The interaction between airway microbiome and host in chronic obstructive pulmonary
disease (COPD) is poorly understood. Here we used a multi-omic meta-analysis approach …
disease (COPD) is poorly understood. Here we used a multi-omic meta-analysis approach …