Noncovalent interactions in proteins and nucleic acids: Beyond hydrogen bonding and π-stacking

S Jena, J Dutta, KD Tulsiyan, AK Sahu… - Chemical Society …, 2022 - pubs.rsc.org
Understanding the noncovalent interactions (NCIs) among the residues of proteins and
nucleic acids, and between drugs and proteins/nucleic acids, etc., has extraordinary …

Halogenated antimicrobial agents to combat drug-resistant pathogens

OS Faleye, BR Boya, JH Lee, I Choi, J Lee… - Pharmacological …, 2024 - Elsevier
Antimicrobial resistance presents us with a potential global crisis as it undermines the
abilities of conventional antibiotics to combat pathogenic microbes. The history of …

Martini 3 coarse‐grained force field: small molecules

R Alessandri, J Barnoud, AS Gertsen… - Advanced Theory …, 2022 - Wiley Online Library
The recent re‐parametrization of the Martini coarse‐grained force field, Martini 3, improved
the accuracy of the model in predicting molecular packing and interactions in molecular …

Chlorine disinfection elevates the toxicity of polystyrene microplastics to human cells by inducing mitochondria-dependent apoptosis

J Qin, PF Xia, XZ Yuan, SG Wang - Journal of Hazardous Materials, 2022 - Elsevier
Microplastics (MPs) are ubiquitous in drinking water and pose potential threats to human
health. Despite increasingly attentions on the toxicity of MPs, the deleterious effects of MPs …

Definition of the Halogen Bond (IUPAC Recommendations 2013): A Revisit

PR Varadwaj, A Varadwaj, HM Marques… - Crystal Growth & …, 2024 - ACS Publications
This Article revisits the “Definition of the Halogen Bond (IUPAC Recommendations
2013)”[Desiraju, GR Pure Appl. Chem. 2013, 85 (8), 1711–1713], recommendations that fail …

Evolution of Br⋯ Br contacts in enantioselective molecular recognition during chiral 2D crystallization

ZY Yi, XQ Yang, JJ Duan, X Zhou, T Chen… - Nature …, 2022 - nature.com
Halogen-mediated interactions play an important role in molecular recognition and
crystallization in many chemical and biological systems, whereas their effect on homochiral …

Halogen Bonding Involving Gold Nucleophiles in Different Oxidation States

IS Aliyarova, EY Tupikina, NS Soldatova… - Inorganic …, 2022 - ACS Publications
A single-crystal X-ray diffraction (XRD) study of diaryliodonium tetrachloroaurates (or, in the
recent terminology, tetrachloridoaurates),[(p-XC6H4) 2I][AuCl4](X= Cl, 1; Br, 2), was …

Dissection of the origin of π-holes and the noncovalent bonds in which they engage

S Scheiner - The Journal of Physical Chemistry A, 2021 - ACS Publications
Accompanying the rapidly growing list of σ-hole bonds has come the acknowledgment of
parallel sorts of noncovalent bonds which owe their stability in large part to a deficiency of …

Anion transporters based on halogen, chalcogen, and pnictogen bonds: towards biological applications

A Singh, A Torres-Huerta, F Meyer, H Valkenier - Chemical science, 2024 - pubs.rsc.org
Motivated by their potential biological applications, anion receptors are increasingly
explored as transmembrane transporters for anions. The vast majority of the reported anion …

Halogen bonds exist between noncovalent ligands and natural nucleic acids

K Mu, Z Zhu, A Abula, C Peng, W Zhu… - Journal of Medicinal …, 2022 - ACS Publications
Because of their strong electron-rich properties, nucleic acids (NAs) can theoretically serve
as halogen bond (XB) acceptors. From a PDB database survey, Kolář found that no XBs …