Applications of machine learning in human microbiome studies: a review on feature selection, biomarker identification, disease prediction and treatment
LJ Marcos-Zambrano… - Frontiers in …, 2021 - frontiersin.org
The number of microbiome-related studies has notably increased the availability of data on
human microbiome composition and function. These studies provide the essential material …
human microbiome composition and function. These studies provide the essential material …
Current understanding of the human microbiome
Our understanding of the link between the human microbiome and disease, including
obesity, inflammatory bowel disease, arthritis and autism, is rapidly expanding …
obesity, inflammatory bowel disease, arthritis and autism, is rapidly expanding …
Gut microbiome, big data and machine learning to promote precision medicine for cancer
The gut microbiome has been implicated in cancer in several ways, as specific microbial
signatures are known to promote cancer development and influence safety, tolerability and …
signatures are known to promote cancer development and influence safety, tolerability and …
Administration of Akkermansia muciniphila Ameliorates Dextran Sulfate Sodium-Induced Ulcerative Colitis in Mice
Inflammatory bowel diseases (IBDs) develop as a result of complex interactions among
genes, innate immunity and environmental factors, which are related to the gut microbiota …
genes, innate immunity and environmental factors, which are related to the gut microbiota …
Functional redundancy-induced stability of gut microbiota subjected to disturbance
The microbiota should be considered as just another component of the human epigenetic
landscape. Thus, health is also a reflection of the diversity and composition of gut microbiota …
landscape. Thus, health is also a reflection of the diversity and composition of gut microbiota …
Correlation and association analyses in microbiome study integrating multiomics in health and disease
Y Xia - Progress in molecular biology and translational …, 2020 - Elsevier
Correlation and association analyses are one of the most widely used statistical methods in
research fields, including microbiome and integrative multiomics studies. Correlation and …
research fields, including microbiome and integrative multiomics studies. Correlation and …
Predictive metabolomic profiling of microbial communities using amplicon or metagenomic sequences
Microbial community metabolomics, particularly in the human gut, are beginning to provide a
new route to identify functions and ecology disrupted in disease. However, these data can …
new route to identify functions and ecology disrupted in disease. However, these data can …
Low dietary fiber intake increases Collinsella abundance in the gut microbiota of overweight and obese pregnant women
LF Gomez-Arango, HL Barrett, SA Wilkinson… - Gut …, 2018 - Taylor & Francis
The gut microbiota contributes to the regulation of glucose metabolism in pregnancy.
Abundance of the genus Collinsella is positively correlated with circulating insulin; however …
Abundance of the genus Collinsella is positively correlated with circulating insulin; however …
Inhalational exposure to particulate matter air pollution alters the composition of the gut microbiome
Recent studies suggest an association between particulate matter (PM) air pollution and
gastrointestinal (GI) disease. In addition to direct deposition, PM can be indirectly deposited …
gastrointestinal (GI) disease. In addition to direct deposition, PM can be indirectly deposited …
Altered Gut Microbiota and Compositional Changes in Firmicutes and Proteobacteria in Mexican Undernourished and Obese Children
EO Méndez-Salazar, MG Ortiz-López… - Frontiers in …, 2018 - frontiersin.org
Mexico is experiencing an epidemiological and nutritional transition period, and Mexican
children are often affected by the double burden of malnutrition, which includes …
children are often affected by the double burden of malnutrition, which includes …