Knowledge-graph-enabled biomedical entity linking: a survey
Abstract Biomedical Entity Linking (BM-EL) task, which aims to match biomedical mentions
in articles to entities in a certain knowledge base (eg, the Unified Medical Language …
in articles to entities in a certain knowledge base (eg, the Unified Medical Language …
Taxonomy enrichment with text and graph vector representations
Abstract Knowledge graphs such as DBpedia, Freebase or Wikidata always contain a
taxonomic backbone that allows the arrangement and structuring of various concepts in …
taxonomic backbone that allows the arrangement and structuring of various concepts in …
KenMeSH: Knowledge-enhanced end-to-end biomedical text labelling
Currently, Medical Subject Headings (MeSH) are manually assigned to every biomedical
article published and subsequently recorded in the PubMed database to facilitate retrieving …
article published and subsequently recorded in the PubMed database to facilitate retrieving …
Graphprompt: Biomedical entity normalization using graph-based prompt templates
Biomedical entity normalization unifies the language across biomedical experiments and
studies, and further enables us to obtain a holistic view of life sciences. Current approaches …
studies, and further enables us to obtain a holistic view of life sciences. Current approaches …
GraphPrompt: Graph-based prompt templates for biomedical synonym prediction
H Xu, J Zhang, Z Wang, S Zhang, M Bhalerao… - Proceedings of the …, 2023 - ojs.aaai.org
In the expansion of biomedical dataset, the same category may be labeled with different
terms, thus being tedious and onerous to curate these terms. Therefore, automatically …
terms, thus being tedious and onerous to curate these terms. Therefore, automatically …
Learning Dynamic Coherence with Graph Attention Network for Biomedical Entity Linking
M Bo, M Zhang - … Joint Conference on Neural Networks (IJCNN …, 2021 - ieeexplore.ieee.org
Biomedical entity linking, which aligns various disease mentions in unstructured documents
to their corresponding standardized entities in a knowledge base (KB), is an essential task in …
to their corresponding standardized entities in a knowledge base (KB), is an essential task in …
Simple Data Augmentation Techniques for Chinese Disease Normalization
Disease name normalization is an important task in the medical domain. It classifies disease
names written in various formats into standardized names, serving as a fundamental …
names written in various formats into standardized names, serving as a fundamental …
Study of Named Entity Recognition Based on Graph Neural Network.
SHU Wenhao, XI Xuefeng… - Journal of …, 2023 - search.ebscohost.com
Named entity recognition is one of the pre-processing tasks in natural language processing,
aiming at identifying desired entities and types from unstructured text, and is used in many …
aiming at identifying desired entities and types from unstructured text, and is used in many …
Evaluation of taxonomy enrichment on diachronic wordnet versions
I Nikishina, N Loukachevitch… - Proceedings of the …, 2021 - aclanthology.org
The vast majority of the existing approaches for taxonomy enrichment apply word
embeddings as they have proven to accumulate contexts (in a broad sense) extracted from …
embeddings as they have proven to accumulate contexts (in a broad sense) extracted from …
[PDF][PDF] Exploring graph-based representations for taxonomy enrichment
I Nikishina, N Loukachevitch… - Proceedings of the …, 2021 - aclanthology.org
The vast majority of the existing approaches for taxonomy enrichment apply word
embeddings as they have proven to accumulate contexts (in a broad sense) extracted from …
embeddings as they have proven to accumulate contexts (in a broad sense) extracted from …