The rapid development of next-generation sequencing (NGS) technology, including
advances in sequencing chemistry, sequencing technologies, bioinformatics, and data …

The application of third-generation sequencing (TGS) technology in genetics and genomics
have provided opportunities to categorize and explore the individual genomic landscapes …

Motivation Recent advances in high-throughput long-read sequencers, such as PacBio and
Oxford Nanopore sequencers, produce longer reads with more errors than short-read …

Abstract Motivation Oxford Nanopore sequencing is a rapidly developed sequencing
technology in recent years. To keep pace with the explosion of the downstream data …

Motivation Nanopore sequencing is one of the leading third-generation sequencing
technologies. A number of computational tools have been developed to facilitate the …

Long-read RNA sequencing has emerged as a powerful tool for transcript discovery, even in
well-annotated organisms. However, assessing the accuracy of different methods in …

The noisy nanopore channel is introduced as a model of the nanopore sequencer in DNA
storage that includes inter-symbol interference, sample duplications, and measurement …

This paper investigates channel coding for DNA data storage, a recent and emerging
paradigm in which both substitution errors and synchronization errors (insertions, deletions) …

The introduction of next-generation sequencing (NGS) in the molecular diagnostic
armamentarium is deeply changing pathology practice and laboratory frameworks. NGS …

In silico approaches for next-generation sequencing (NGS) data modeling have utility in the
clinical laboratory as a tool for clinical assay validation. In silico NGS data can take a variety …