Recent applications of deep learning and machine intelligence on in silico drug discovery: methods, tools and databases
The identification of interactions between drugs/compounds and their targets is crucial for
the development of new drugs. In vitro screening experiments (ie bioassays) are frequently …
the development of new drugs. In vitro screening experiments (ie bioassays) are frequently …
[HTML][HTML] Artificial intelligence in pharmaceutical sciences
Drug discovery and development affects various aspects of human health and dramatically
impacts the pharmaceutical market. However, investments in a new drug often go …
impacts the pharmaceutical market. However, investments in a new drug often go …
AI-based structure prediction empowers integrative structural analysis of human nuclear pores
S Mosalaganti, A Obarska-Kosinska, M Siggel… - Science, 2022 - science.org
INTRODUCTION The eukaryotic nucleus protects the genome and is enclosed by the two
membranes of the nuclear envelope. Nuclear pore complexes (NPCs) perforate the nuclear …
membranes of the nuclear envelope. Nuclear pore complexes (NPCs) perforate the nuclear …
[HTML][HTML] The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, and phase separates with RNA
Abstract The SARS-CoV-2 nucleocapsid (N) protein is an abundant RNA-binding protein
critical for viral genome packaging, yet the molecular details that underlie this process are …
critical for viral genome packaging, yet the molecular details that underlie this process are …
A prion-like protein regulator of seed germination undergoes hydration-dependent phase separation
Many organisms evolved strategies to survive desiccation. Plant seeds protect dehydrated
embryos from various stressors and can lay dormant for millennia. Hydration is the key …
embryos from various stressors and can lay dormant for millennia. Hydration is the key …
An in silico deep learning approach to multi-epitope vaccine design: a SARS-CoV-2 case study
The rampant spread of COVID-19, an infectious disease caused by SARS-CoV-2, all over
the world has led to over millions of deaths, and devastated the social, financial and political …
the world has led to over millions of deaths, and devastated the social, financial and political …
Cryo-EM structure of a type IV secretion system
K Macé, AK Vadakkepat, A Redzej, N Lukoyanova… - Nature, 2022 - nature.com
Bacterial conjugation is the fundamental process of unidirectional transfer of DNAs, often
plasmid DNAs, from a donor cell to a recipient cell. It is the primary means by which …
plasmid DNAs, from a donor cell to a recipient cell. It is the primary means by which …
NetSurfP‐2.0: Improved prediction of protein structural features by integrated deep learning
The ability to predict local structural features of a protein from the primary sequence is of
paramount importance for unraveling its function in absence of experimental structural …
paramount importance for unraveling its function in absence of experimental structural …
Externalized histone H4 orchestrates chronic inflammation by inducing lytic cell death
C Silvestre-Roig, Q Braster, K Wichapong, EY Lee… - Nature, 2019 - nature.com
The perpetuation of inflammation is an important pathophysiological contributor to the global
medical burden. Chronic inflammation is promoted by non-programmed cell death,; …
medical burden. Chronic inflammation is promoted by non-programmed cell death,; …
NMRFAM-SPARKY: enhanced software for biomolecular NMR spectroscopy
W Lee, M Tonelli, JL Markley - Bioinformatics, 2015 - academic.oup.com
SPARKY (Goddard and Kneller, SPARKY 3) remains the most popular software program for
NMR data analysis, despite the fact that development of the package by its originators …
NMR data analysis, despite the fact that development of the package by its originators …