Chromatin and epigenetic dysregulation of prostate cancer development, progression, and therapeutic response

K Kukkonen, S Taavitsainen, L Huhtala, J Uusi-Makela… - Cancers, 2021 - mdpi.com
Simple Summary Chromatin and epigenetic alterations in cancer are responsible for a wide
range of transcriptional changes that link DNA mutations to tumor phenotype. In this review …

Mechanism-centric approaches for biomarker detection and precision therapeutics in cancer

CY Yu, A Mitrofanova - Frontiers in Genetics, 2021 - frontiersin.org
Biomarker discovery is at the heart of personalized treatment planning and cancer precision
therapeutics, encompassing disease classification and prognosis, prediction of treatment …

Mechanism-centric regulatory network identifies NME2 and MYC programs as markers of Enzalutamide resistance in CRPC

S Panja, MI Truica, CY Yu, V Saggurthi… - Nature …, 2024 - nature.com
Heterogeneous response to Enzalutamide, a second-generation androgen receptor
signaling inhibitor, is a central problem in castration-resistant prostate cancer (CRPC) …

A ferroptosis-related prognostic model with excellent clinical performance based on the exploration of the mechanism of oral squamous cell carcinoma progression

X Fan, Y Zhong, F Yuan, L Zhang, Y Cai, L Liao - Scientific Reports, 2023 - nature.com
As a hot topic today, ferroptosis is closely involved in the progression and treatment of
cancer. Accordingly, we built a prognostic model around ferroptosis to predict the overall …

CSMD1 mutation related to immunity can be used as a marker to evaluate the clinical therapeutic effect and prognosis of patients with esophageal cancer

X Fan, J Song, Y Fan, J Li, Y Chen, H Zhu… - International journal of …, 2021 - Taylor & Francis
Introduction As a highly aggressive tumor with a poor prognosis, esophageal cancer
(ESCA)'s relationship with gene mutations is unclear. Therefore, we tried to explore the role …

Comprehensive analysis of radiosensitivity in head and neck squamous cell carcinoma

G Li, Y Jiang, G Li, Q Qiao - Radiotherapy and Oncology, 2021 - Elsevier
Background Radioresistance is a major barrier to the successful treatment of head and neck
squamous cell carcinoma (HNSCC). Methods We took advantage of different types of data …

Combining the radiomics signature and HPV status for the risk stratification of patients with OPC

P Wang, X Wang, M Zhang, G Li, N Zhao… - Oral …, 2024 - Wiley Online Library
Objective The objective was to perform risk stratification of oropharyngeal cancer (OPC) for
treatment de‐escalation based on the radiomics analysis and human papillomavirus (HPV) …

[HTML][HTML] Big data to knowledge: application of machine learning to predictive modeling of therapeutic response in cancer

S Panja, S Rahem, CJ Chu, A Mitrofanova - Current genomics, 2021 - ncbi.nlm.nih.gov
Background In recent years, the availability of high throughput technologies, establishment
of large molecular patient data repositories, and advancement in computing power and …

Building Minimized Epigenetic Clock by iPlex MassARRAY Platform

E Davydova, A Perenkov, M Vedunova - Genes, 2024 - mdpi.com
Epigenetic clocks are valuable tools for estimating both chronological and biological age by
assessing DNA methylation levels at specific CpG dinucleotides. While conventional …

Gene signatures based on therapy responsiveness provide guidance for combined radiotherapy and chemotherapy for lower grade glioma

G Li, Y Jiang, X Lyu, Y Cai, M Zhang… - Journal of Cellular …, 2020 - Wiley Online Library
For a long time, the guidance for adjuvant chemoradiotherapy for lower grade glioma (LGG)
lacks instructions on the application timing and order of radiotherapy (RT) and …