Signaling via the NFκB system
The nuclear factor kappa B (NFκB) family of transcription factors is a key regulator of immune
development, immune responses, inflammation, and cancer. The NFκB signaling system …
development, immune responses, inflammation, and cancer. The NFκB signaling system …
MYC: connecting selective transcriptional control to global RNA production
TR Kress, A Sabò, B Amati - Nature Reviews Cancer, 2015 - nature.com
Two opposing models have been proposed to describe the function of the MYC oncoprotein
in shaping cellular transcriptomes: one posits that MYC amplifies transcription at all active …
in shaping cellular transcriptomes: one posits that MYC amplifies transcription at all active …
[HTML][HTML] Native elongating transcript sequencing reveals human transcriptional activity at nucleotide resolution
Major features of transcription by human RNA polymerase II (Pol II) remain poorly defined
due to a lack of quantitative approaches for visualizing Pol II progress at nucleotide …
due to a lack of quantitative approaches for visualizing Pol II progress at nucleotide …
[HTML][HTML] Splicing of nascent RNA coincides with intron exit from RNA polymerase II
Protein-coding genes in eukaryotes are transcribed by RNA polymerase II (Pol II) and
introns are removed from pre-mRNA by the spliceosome. Understanding the time lag …
introns are removed from pre-mRNA by the spliceosome. Understanding the time lag …
Nascent RNA and the coordination of splicing with transcription
KM Neugebauer - Cold Spring Harbor Perspectives in …, 2019 - cshperspectives.cshlp.org
At each active protein-encoding gene, nascent RNA is tethered to the DNA axis by
elongating RNA polymerase II (Pol II) and is continuously altered by splicing and other …
elongating RNA polymerase II (Pol II) and is continuously altered by splicing and other …
Perfect timing: splicing and transcription rates in living cells
An important step toward understanding gene regulation is the elucidation of the time
necessary for the completion of individual steps. Measurement of reaction rates can reveal …
necessary for the completion of individual steps. Measurement of reaction rates can reveal …
[HTML][HTML] Global donor and acceptor splicing site kinetics in human cells
RNA splicing is an essential part of eukaryotic gene expression. Although the mechanism of
splicing has been extensively studied in vitro, in vivo kinetics for the two-step splicing …
splicing has been extensively studied in vitro, in vivo kinetics for the two-step splicing …
The determinants of alternative RNA splicing in human cells
TV Ramanouskaya, VV Grinev - Molecular Genetics and Genomics, 2017 - Springer
Alternative splicing represents an important level of the regulation of gene function in
eukaryotic organisms. It plays a critical role in virtually every biological process within an …
eukaryotic organisms. It plays a critical role in virtually every biological process within an …
[HTML][HTML] Position-dependent effects of RNA-binding proteins in the context of co-transcriptional splicing
T Horn, A Gosliga, C Li, M Enculescu… - npj Systems Biology and …, 2023 - nature.com
Alternative splicing is an important step in eukaryotic mRNA pre-processing which increases
the complexity of gene expression programs, but is frequently altered in disease. Previous …
the complexity of gene expression programs, but is frequently altered in disease. Previous …
[HTML][HTML] Exon definition facilitates reliable control of alternative splicing in the RON proto-oncogene
Alternative splicing is a key step in eukaryotic gene expression that allows for the production
of multiple transcript and protein isoforms from the same gene. Even though splicing is …
of multiple transcript and protein isoforms from the same gene. Even though splicing is …