Adaptation of Pseudomonas aeruginosa to the cystic fibrosis airway: an evolutionary perspective
The airways of patients with cystic fibrosis (CF) are nearly always infected with many
different microorganisms. This environment offers warm, humid and nutrient-rich conditions …
different microorganisms. This environment offers warm, humid and nutrient-rich conditions …
The distribution of fitness effects of new mutations
A Eyre-Walker, PD Keightley - Nature Reviews Genetics, 2007 - nature.com
The distribution of fitness effects (DFE) of new mutations is a fundamental entity in genetics
that has implications ranging from the genetic basis of complex disease to the stability of the …
that has implications ranging from the genetic basis of complex disease to the stability of the …
The molecular diversity of adaptive convergence
O Tenaillon, A Rodríguez-Verdugo, RL Gaut… - Science, 2012 - science.org
To estimate the number and diversity of beneficial mutations, we experimentally evolved 115
populations of Escherichia coli to 42.2° C for 2000 generations and sequenced one genome …
populations of Escherichia coli to 42.2° C for 2000 generations and sequenced one genome …
Negative epistasis between beneficial mutations in an evolving bacterial population
Epistatic interactions between mutations play a prominent role in evolutionary theories.
Many studies have found that epistasis is widespread, but they have rarely considered …
Many studies have found that epistasis is widespread, but they have rarely considered …
Fitness and its role in evolutionary genetics
HA Orr - Nature Reviews Genetics, 2009 - nature.com
Although the operation of natural selection requires that genotypes differ in fitness, some
geneticists may find it easier to understand natural selection than fitness. Partly this reflects …
geneticists may find it easier to understand natural selection than fitness. Partly this reflects …
Experimental design, population dynamics, and diversity in microbial experimental evolution
In experimental evolution, laboratory-controlled conditions select for the adaptation of
species, which can be monitored in real time. Despite the current popularity of such …
species, which can be monitored in real time. Despite the current popularity of such …
Capturing the mutational landscape of the beta-lactamase TEM-1
H Jacquier, A Birgy, H Le Nagard… - Proceedings of the …, 2013 - National Acad Sciences
Adaptation proceeds through the selection of mutations. The distribution of mutant fitness
effect and the forces shaping this distribution are therefore keys to predict the evolutionary …
effect and the forces shaping this distribution are therefore keys to predict the evolutionary …
The utility of Fisher's geometric model in evolutionary genetics
O Tenaillon - Annual review of ecology, evolution, and …, 2014 - annualreviews.org
The accumulation of data on the genomic bases of adaptation has triggered renewed
interest in theoretical models of adaptation. Among these models, Fisher's geometric model …
interest in theoretical models of adaptation. Among these models, Fisher's geometric model …
Parallel reduction in flowering time from de novo mutations enable evolutionary rescue in colonizing lineages
Understanding how populations adapt to abrupt environmental change is necessary to
predict responses to future challenges, but identifying specific adaptive variants, quantifying …
predict responses to future challenges, but identifying specific adaptive variants, quantifying …
Hidden reaction norms, cryptic genetic variation, and evolvability
CD Schlichting - Annals of the new York Academy of Sciences, 2008 - Wiley Online Library
There is reason to suspect that hidden reaction norms (variation that is phenotypically
expressed only after changes in internal or external environmental conditions) may store an …
expressed only after changes in internal or external environmental conditions) may store an …