Whole‐genome sequencing approaches for conservation biology: Advantages, limitations and practical recommendations
AP Fuentes‐Pardo, DE Ruzzante - Molecular ecology, 2017 - Wiley Online Library
Whole‐genome resequencing (WGR) is a powerful method for addressing fundamental
evolutionary biology questions that have not been fully resolved using traditional methods …
evolutionary biology questions that have not been fully resolved using traditional methods …
Guidelines for planning genomic assessment and monitoring of locally adaptive variation to inform species conservation
Identifying and monitoring locally adaptive genetic variation can have direct utility for
conserving species at risk, especially when management may include actions such as …
conserving species at risk, especially when management may include actions such as …
Stacks 2: Analytical methods for paired‐end sequencing improve RADseq‐based population genomics
NC Rochette, AG Rivera‐Colón… - Molecular ecology, 2019 - Wiley Online Library
For half a century population genetics studies have put type II restriction endonucleases to
work. Now, coupled with massively‐parallel, short‐read sequencing, the family of RAD …
work. Now, coupled with massively‐parallel, short‐read sequencing, the family of RAD …
A beginner's guide to low‐coverage whole genome sequencing for population genomics
Low‐coverage whole genome sequencing (lcWGS) has emerged as a powerful and cost‐
effective approach for population genomic studies in both model and nonmodel species …
effective approach for population genomic studies in both model and nonmodel species …
The search for loci under selection: trends, biases and progress
Detecting genetic variants under selection using FST outlier analysis (OA) and
environmental association analyses (EAAs) are popular approaches that provide insight into …
environmental association analyses (EAAs) are popular approaches that provide insight into …
Improving conservation policy with genomics: a guide to integrating adaptive potential into US Endangered Species Act decisions for conservation practitioners and …
Rapid environmental change makes adaptive potential—the capacity of populations to
evolve genetically based changes in response to selection—more important than ever for …
evolve genetically based changes in response to selection—more important than ever for …
Unbroken: RADseq remains a powerful tool for understanding the genetics of adaptation in natural populations
JM Catchen, PA Hohenlohe… - Molecular ecology …, 2017 - Wiley Online Library
Recently, Lowry et al. addressed the ability of RADseq approaches to detect loci under
selection in genome scans. While the authors raise important considerations, such as …
selection in genome scans. While the authors raise important considerations, such as …
How useful is genomic data for predicting maladaptation to future climate?
Methods using genomic information to forecast potential population maladaptation to climate
change or new environments are becoming increasingly common, yet the lack of model …
change or new environments are becoming increasingly common, yet the lack of model …
Population genomics: advancing understanding of nature
Population genomics is advancing our understanding of evolution, ecology, conservation,
agriculture, forestry, and human health by allowing new and long-standing questions to be …
agriculture, forestry, and human health by allowing new and long-standing questions to be …
Intercontinental genomic parallelism in multiple three-spined stickleback adaptive radiations
Parallelism, the evolution of similar traits in populations diversifying in similar conditions,
provides strong evidence of adaptation by natural selection. Many studies of parallelism …
provides strong evidence of adaptation by natural selection. Many studies of parallelism …