Plant mitochondrial genomes: dynamics and mechanisms of mutation

JM Gualberto, KJ Newton - Annual review of plant biology, 2017 - annualreviews.org
The large mitochondrial genomes of angiosperms are unusually dynamic because of
recombination activities involving repeated sequences. These activities generate …

The plant mitochondrial genome: dynamics and maintenance

JM Gualberto, D Mileshina, C Wallet, AK Niazi… - Biochimie, 2014 - Elsevier
Plant mitochondria have a complex and peculiar genetic system. They have the largest
genomes, as compared to organelles from other eukaryotic organisms. These can expand …

The evolution of the plastid chromosome in land plants: gene content, gene order, gene function

S Wicke, GM Schneeweiss, CW Depamphilis… - Plant molecular …, 2011 - Springer
This review bridges functional and evolutionary aspects of plastid chromosome architecture
in land plants and their putative ancestors. We provide an overview on the structure and …

Plastid genomes of seed plants

RK Jansen, TA Ruhlman - Genomics of chloroplasts and mitochondria, 2012 - Springer
The field of comparative plastid genomics has burgeoned during the past decade, largely
due to the availability of rapid, less expensive genome sequencing technologies. Currently …

[HTML][HTML] Incongruence between gene trees and species trees and phylogenetic signal variation in plastid genes

DJP Goncalves, BB Simpson, EM Ortiz… - Molecular phylogenetics …, 2019 - Elsevier
The current classification of angiosperms is based primarily on concatenated plastid
markers and maximum likelihood (ML) inference. This approach has been justified by the …

Recombination and the maintenance of plant organelle genome stability

A Maréchal, N Brisson - New Phytologist, 2010 - Wiley Online Library
Like their nuclear counterpart, the plastid and mitochondrial genomes of plants have to be
faithfully replicated and repaired to ensure the normal functioning of the plant. Inability to …

Extreme reconfiguration of plastid genomes in the angiosperm family Geraniaceae: rearrangements, repeats, and codon usage

MM Guisinger, JV Kuehl, JL Boore… - Molecular biology and …, 2011 - academic.oup.com
Geraniaceae plastid genomes (plastomes) have experienced a remarkable number of
genomic changes. The plastomes of Erodium texanum, Geranium palmatum, and Monsonia …

Break induced replication in eukaryotes: mechanisms, functions, and consequences

CJ Sakofsky, A Malkova - Critical reviews in biochemistry and …, 2017 - Taylor & Francis
Break-induced replication (BIR) is an important pathway specializing in repair of one-ended
double-strand DNA breaks (DSBs). This type of DSB break typically arises at collapsed …

In planta determination of the mRNA-binding proteome of Arabidopsis etiolated seedlings

M Reichel, Y Liao, M Rettel, C Ragan, M Evers… - The Plant …, 2016 - academic.oup.com
RNA binding proteins (RBPs) control the fate and expression of a transcriptome. Despite this
fundamental importance, our understanding of plant RBPs is rudimentary, being mainly …

DNA repair and the stability of the plant mitochondrial genome

N Chevigny, D Schatz-Daas, F Lotfi… - International Journal of …, 2020 - mdpi.com
The mitochondrion stands at the center of cell energy metabolism. It contains its own
genome, the mtDNA, that is a relic of its prokaryotic symbiotic ancestor. In plants, the …