Long noncoding RNAs in plants
AT Wierzbicki, T Blevins… - Annual Review of Plant …, 2021 - annualreviews.org
Plants have an extraordinary diversity of transcription machineries, including five nuclear
DNA-dependent RNA polymerases. Four of these enzymes are dedicated to the production …
DNA-dependent RNA polymerases. Four of these enzymes are dedicated to the production …
Protein phosphorylation: A molecular switch in plant signaling
WJ Zhang, Y Zhou, Y Zhang, YH Su, T Xu - Cell Reports, 2023 - cell.com
Protein phosphorylation modification is crucial for signaling transduction in plant
development and environmental adaptation. By precisely phosphorylating crucial …
development and environmental adaptation. By precisely phosphorylating crucial …
Tuning plant phenotypes by precise, graded downregulation of gene expression
The ability to control gene expression and generate quantitative phenotypic changes is
essential for breeding new and desired traits into crops. Here we report an efficient, facile …
essential for breeding new and desired traits into crops. Here we report an efficient, facile …
Allele-aware chromosome-level genome assembly of Artemisia annua reveals the correlation between ADS expansion and artemisinin yield
B Liao, X Shen, L Xiang, S Guo, S Chen, Y Meng… - Molecular plant, 2022 - cell.com
Artemisia annua is the major natural source of artemisinin, an anti-malarial medicine
commonly used worldwide. Here, we present chromosome-level haploid maps for two A …
commonly used worldwide. Here, we present chromosome-level haploid maps for two A …
Alternative splicing landscapes in Arabidopsis thaliana across tissues and stress conditions highlight major functional differences with animals
Background Alternative splicing (AS) is a widespread regulatory mechanism in multicellular
organisms. Numerous transcriptomic and single-gene studies in plants have investigated AS …
organisms. Numerous transcriptomic and single-gene studies in plants have investigated AS …
Synthetic promoter designs enabled by a comprehensive analysis of plant core promoters
Targeted engineering of plant gene expression holds great promise for ensuring food
security and for producing biopharmaceuticals in plants. However, this engineering requires …
security and for producing biopharmaceuticals in plants. However, this engineering requires …
Seed 'primeomics': plants memorize their germination under stress
AK Srivastava, J Suresh Kumar… - Biological …, 2021 - Wiley Online Library
Seed priming is a pre‐germination treatment administered through various chemical,
physical and biological agents, which induce mild stress during the early phases of …
physical and biological agents, which induce mild stress during the early phases of …
Rhizosphere engineering for soil carbon sequestration
C Wang, Y Kuzyakov - Trends in Plant Science, 2024 - cell.com
The rhizosphere is the central hotspot of water and nutrient uptake by plants,
rhizodeposition, microbial activities, and plant-soil-microbial interactions. The plasticity of …
rhizodeposition, microbial activities, and plant-soil-microbial interactions. The plasticity of …
Evolutionarily informed deep learning methods for predicting relative transcript abundance from DNA sequence
JD Washburn, MK Mejia-Guerra… - Proceedings of the …, 2019 - National Acad Sciences
Deep learning methodologies have revolutionized prediction in many fields and show
potential to do the same in molecular biology and genetics. However, applying these …
potential to do the same in molecular biology and genetics. However, applying these …
Emerging concepts of potassium homeostasis in plants
AK Srivastava, A Shankar… - Journal of …, 2020 - academic.oup.com
Potassium (K+) is an essential cation in all organisms that influences crop production and
ecosystem stability. Although most soils are rich in K minerals, relatively little K+ is present in …
ecosystem stability. Although most soils are rich in K minerals, relatively little K+ is present in …