Methods and applications for single-cell and spatial multi-omics
K Vandereyken, A Sifrim, B Thienpont… - Nature Reviews Genetics, 2023 - nature.com
The joint analysis of the genome, epigenome, transcriptome, proteome and/or metabolome
from single cells is transforming our understanding of cell biology in health and disease. In …
from single cells is transforming our understanding of cell biology in health and disease. In …
Spatial omics technologies at multimodal and single cell/subcellular level
Spatial omics technologies enable a deeper understanding of cellular organizations and
interactions within a tissue of interest. These assays can identify specific compartments or …
interactions within a tissue of interest. These assays can identify specific compartments or …
Into the multiverse: advances in single-cell multiomic profiling
S Ogbeide, F Giannese, L Mincarelli, IC Macaulay - Trends in Genetics, 2022 - cell.com
Single-cell transcriptomic approaches have revolutionised the study of complex biological
systems, with the routine measurement of gene expression in thousands of cells enabling …
systems, with the routine measurement of gene expression in thousands of cells enabling …
[HTML][HTML] Spatially resolved transcriptomics: a comprehensive review of their technological advances, applications, and challenges
The ability to explore life kingdoms is largely driven by innovations and breakthroughs in
technology, from the invention of the microscope 350 years ago to the recent emergence of …
technology, from the invention of the microscope 350 years ago to the recent emergence of …
Spatial transcriptomics technology in cancer research
In recent years, spatial transcriptomics (ST) technologies have developed rapidly and have
been widely used in constructing spatial tissue atlases and characterizing spatiotemporal …
been widely used in constructing spatial tissue atlases and characterizing spatiotemporal …
[HTML][HTML] Spatial-CITE-seq: spatially resolved high-plex protein and whole transcriptome co-mapping
We present spatial-CITE-seq for high-plex protein and whole transcriptome co-mapping,
which was firstly demonstrated for profiling 189 proteins and transcriptome in multiple …
which was firstly demonstrated for profiling 189 proteins and transcriptome in multiple …
Spatially resolved host-bacteria-fungi interactomes via spatial metatranscriptomics
S Saarenpää, O Shalev, H Ashkenazy… - BioRxiv, 2022 - biorxiv.org
All multicellular organisms are closely associated with microbes, which have a major impact
on the health of their host. The interactions of microbes among themselves and with the host …
on the health of their host. The interactions of microbes among themselves and with the host …
Spatiotemporal Omics-Refining the landscape of precision medicine
Current streamline of precision medicine uses histomorphological and molecular
information to indicate individual phenotypes and genotypes to achieve optimal outcome of …
information to indicate individual phenotypes and genotypes to achieve optimal outcome of …
[HTML][HTML] Breast cancer macrophage heterogeneity and self-renewal are determined by spatial localization
Tumor-infiltrating macrophages support critical steps in tumor progression, and their
accumulation in the tumor microenvironment (TME) is associated with adverse outcomes …
accumulation in the tumor microenvironment (TME) is associated with adverse outcomes …
History of key regulatory peptide systems and perspectives for future research
D Chen, JF Rehfeld, AG Watts… - Journal of …, 2023 - Wiley Online Library
Throughout the 20th Century, regulatory peptide discovery advanced from the identification
of gut hormones to the extraction and characterization of hypothalamic hypophysiotropic …
of gut hormones to the extraction and characterization of hypothalamic hypophysiotropic …