Single-molecule experiments in biological physics: methods and applications

F Ritort - Journal of Physics: Condensed Matter, 2006 - iopscience.iop.org
I review single-molecule experiments (SMEs) in biological physics. Recent technological
developments have provided the tools to design and build scientific instruments of high …

[图书][B] Statistical mechanics of nonequilbrium liquids

DJ Evans, GP Morriss - 2007 - library.oapen.org
During the 1980's there were many developments regarding the nonequilibrium statistical
mechanics of dense classical atomic fluids. These developments have had a major impact …

Nonequilibrium fluctuations in small systems: From physics to biology

F Ritort - Advances in chemical physics, 2008 - Wiley Online Library
Thermodynamics, a scientific discipline inherited from the 18th century, is facing new
challenges in the description of nonequilibrium small (sometimes also called mesoscopic) …

Path-integral analysis of fluctuation theorems for general Langevin processes

VY Chernyak, M Chertkov… - Journal of Statistical …, 2006 - iopscience.iop.org
We examine classical, transient fluctuation theorems within the unifying framework of
Langevin dynamics. We explicitly distinguish between the effects of non-conservative forces …

[图书][B] Microscopic chaos, fractals and transport in nonequilibrium statistical mechanics

R Klages - 2007 - books.google.com
A valuable introduction for newcomers as well as an important reference and source of
inspiration for established researchers, this book provides an up-to-date summary of central …

The Jarzynski identity derived from general Hamiltonian or non-Hamiltonian dynamics reproducing NVT or NPT ensembles

MA Cuendet - The Journal of chemical physics, 2006 - pubs.aip.org
The Jarzynski identity (JI) relates nonequilibrium work averages to thermodynamic free
energy differences. It was shown in a recent contribution [MA Cuendet, Phys. Rev. Lett. 96 …

Charged particle in a magnetic field: Jarzynski equality

AM Jayannavar, M Sahoo - Physical Review E—Statistical, Nonlinear, and Soft …, 2007 - APS
We describe some solvable models which illustrate the Jarzynski theorem and related
fluctuation theorems. We consider a charged particle in the presence of a magnetic field in a …

Bayesian estimates of free energies from nonequilibrium work data in the presence of instrument noise

P Maragakis, F Ritort, C Bustamante… - The Journal of …, 2008 - pubs.aip.org
The Jarzynski equality and the fluctuation theorem relate equilibrium free energy differences
to nonequilibrium measurements of the work. These relations extend to single-molecule …

Fluctuation theorem for the effusion of an ideal gas

B Cleuren, C Van den Broeck, R Kawai - Physical Review E—Statistical …, 2006 - APS
The probability distribution of the entropy production for the effusion of an ideal gas between
two compartments is calculated explicitly. The fluctuation theorem is verified. The analytic …

Large deviations for quadratic functionals of stable Gauss–Markov chains and entropy production

M Zamparo, M Semeraro - Journal of Mathematical Physics, 2023 - pubs.aip.org
In this paper, we establish a large deviation principle for the entropy production rate of
possible non-stationary, centered stable Gauss–Markov chains, verifying the Gallavotti …