Structural connectomics in brain diseases

A Griffa, PS Baumann, JP Thiran, P Hagmann - Neuroimage, 2013 - Elsevier
Imaging the connectome in vivo has become feasible through the integration of several
rapidly developing fields of science and engineering, namely magnetic resonance imaging …

Mapping neurotransmitter systems to the structural and functional organization of the human neocortex

JY Hansen, G Shafiei, RD Markello, K Smart… - Nature …, 2022 - nature.com
Neurotransmitter receptors support the propagation of signals in the human brain. How
receptor systems are situated within macro-scale neuroanatomy and how they shape …

Local molecular and global connectomic contributions to cross-disorder cortical abnormalities

JY Hansen, G Shafiei, JW Vogel, K Smart… - Nature …, 2022 - nature.com
Numerous brain disorders demonstrate structural brain abnormalities, which are thought to
arise from molecular perturbations or connectome miswiring. The unique and shared …

Gradients of structure–function tethering across neocortex

B Vázquez-Rodríguez, LE Suárez… - Proceedings of the …, 2019 - National Acad Sciences
The white matter architecture of the brain imparts a distinct signature on neuronal
coactivation patterns. Interregional projections promote synchrony among distant neuronal …

Dipy, a library for the analysis of diffusion MRI data

E Garyfallidis, M Brett, B Amirbekian… - Frontiers in …, 2014 - frontiersin.org
Diffusion Imaging in Python (Dipy) is a free and open source software project for the analysis
of data from diffusion magnetic resonance imaging (dMRI) experiments. dMRI is an …

Topographic gradients of intrinsic dynamics across neocortex

G Shafiei, RD Markello, R Vos de Wael, BC Bernhardt… - elife, 2020 - elifesciences.org
The intrinsic dynamics of neuronal populations are shaped by both microscale attributes and
macroscale connectome architecture. Here we comprehensively characterize the rich …

[HTML][HTML] Processing of structural neuroimaging data in young children: Bridging the gap between current practice and state-of-the-art methods

T Vân Phan, D Smeets, JB Talcott… - Developmental cognitive …, 2018 - Elsevier
The structure of the brain is subject to very rapid developmental changes during early
childhood. Pediatric studies based on Magnetic Resonance Imaging (MRI) over this age …

Cooperative and competitive spreading dynamics on the human connectome

B Mišić, RF Betzel, A Nematzadeh, J Goni, A Griffa… - Neuron, 2015 - cell.com
Increasingly detailed data on the network topology of neural circuits create a need for
theoretical principles that explain how these networks shape neural communication. Here …

[HTML][HTML] Generative models of the human connectome

RF Betzel, A Avena-Koenigsberger, J Goñi, Y He… - Neuroimage, 2016 - Elsevier
The human connectome represents a network map of the brain's wiring diagram and the
pattern into which its connections are organized is thought to play an important role in …

Learning function from structure in neuromorphic networks

LE Suárez, BA Richards, G Lajoie… - Nature Machine …, 2021 - nature.com
The connection patterns of neural circuits in the brain form a complex network. Collective
signalling within the network manifests as patterned neural activity and is thought to support …