Global genetic diversity status and trends: towards a suite of Essential Biodiversity Variables (EBVs) for genetic composition

S Hoban, FI Archer, LD Bertola, JG Bragg… - Biological …, 2022 - Wiley Online Library
Biodiversity underlies ecosystem resilience, ecosystem function, sustainable economies,
and human well‐being. Understanding how biodiversity sustains ecosystems under …

Third-generation sequencing: the spearhead towards the radical transformation of modern genomics

K Athanasopoulou, MA Boti, PG Adamopoulos… - Life, 2021 - mdpi.com
Although next-generation sequencing (NGS) technology revolutionized sequencing, offering
a tremendous sequencing capacity with groundbreaking depth and accuracy, it continues to …

Nanopore technology and its applications in gene sequencing

B Lin, J Hui, H Mao - Biosensors, 2021 - mdpi.com
In recent years, nanopore technology has become increasingly important in the field of life
science and biomedical research. By embedding a nano-scale hole in a thin membrane and …

ONTbarcoder and MinION barcodes aid biodiversity discovery and identification by everyone, for everyone

A Srivathsan, L Lee, K Katoh, E Hartop, SN Kutty… - BMC biology, 2021 - Springer
Background DNA barcodes are a useful tool for discovering, understanding, and monitoring
biodiversity which are critical tasks at a time of rapid biodiversity loss. However, widespread …

[HTML][HTML] Genetic diversity is considered important but interpreted narrowly in country reports to the Convention on Biological Diversity: Current actions and indicators …

S Hoban, CD Campbell, JM da Silva, R Ekblom… - Biological …, 2021 - Elsevier
International agreements such as the Convention on Biological Diversity (CBD) have
committed to conserve, and sustainably and equitably use, biodiversity. The CBD is a vital …

DiversityScanner: Robotic handling of small invertebrates with machine learning methods

L Wührl, C Pylatiuk, M Giersch, F Lapp… - Molecular ecology …, 2022 - Wiley Online Library
Invertebrate biodiversity remains poorly understood although it comprises much of the
terrestrial animal biomass, most species and supplies many ecosystem services. The main …

A practical guide to DNA metabarcoding for entomological ecologists

M Liu, LJ Clarke, SC Baker, GJ Jordan… - Ecological …, 2020 - Wiley Online Library
1. DNA metabarcoding is a cost‐effective species identification approach with great potential
to assist entomological ecologists. This review presents a practical guide to help …

A scalable, easy-to-deploy protocol for Cas13-based detection of SARS-CoV-2 genetic material

JN Rauch, E Valois, SC Solley, F Braig… - Journal of clinical …, 2021 - Am Soc Microbiol
The COVID-19 pandemic has created massive demand for widespread, distributed tools for
detecting SARS-CoV-2 genetic material. The hurdles to scalable testing include reagent and …

GenStore: A high-performance in-storage processing system for genome sequence analysis

N Mansouri Ghiasi, J Park, H Mustafa, J Kim… - Proceedings of the 27th …, 2022 - dl.acm.org
Read mapping is a fundamental step in many genomics applications. It is used to identify
potential matches and differences between fragments (called reads) of a sequenced …

Global commitments to conserving and monitoring genetic diversity are now necessary and feasible

S Hoban, MW Bruford, WC Funk, P Galbusera… - Bioscience, 2021 - academic.oup.com
Global conservation policy and action have largely neglected protecting and monitoring
genetic diversity—one of the three main pillars of biodiversity. Genetic diversity (diversity …