Integrative rDNAomics—importance of the oldest repetitive fraction of the eukaryote genome

R Symonová - Genes, 2019 - mdpi.com
Nuclear ribosomal RNA (rRNA) genes represent the oldest repetitive fraction universal to all
eukaryotic genomes. Their deeply anchored universality and omnipresence during …

High evolutionary dynamism in 5S rDNA of fish: state of the art

L Rebordinos, I Cross, A Merlo - Cytogenetic and Genome Research, 2013 - karger.com
Abstract The 5S ribosomal DNA (rDNA) consists of one transcriptional unit of about 120
base pairs, which is separated from the next unit by a non-transcribed spacer (NTS). The …

Expression of distinct maternal and somatic 5.8 S, 18S, and 28S rRNA types during zebrafish development

MD Locati, JFB Pagano, G Girard, WA Ensink… - Rna, 2017 - rnajournal.cshlp.org
There is mounting evidence that the ribosome is not a static translation machinery, but a cell-
specific, adaptive system. Ribosomal variations have mostly been studied at the protein …

Organization and evolution of 5S ribosomal DNA in the fish genome

C Martins, AP Wasko - Focus on genome research, 2004 - books.google.com
In higher eukaryotes, the 5S ribosomal multigene family (5S rDNA) is tandemly organized in
repeat units composed of a coding region (5S rRNA gene) and a nontranscribed spacer …

Cytogenetic Mapping of the Retroelements Rex1, Rex3 and Rex6 among Cichlid Fish: New Insights on the Chromosomal Distribution of Transposable Elements

GT Valente, J Mazzuchelli, IA Ferreira… - … and Genome Research, 2011 - karger.com
To enhance our understanding of the organization of the genome and chromosome
evolution of cichlid fish species, we have isolated and physically mapped onto the …

Chromosomes and repetitive DNAs: a contribution to the knowledge of fish genome

C Martins - Fish cytogenetics, 2007 - books.google.com
Primary studies on whole sequenced genomes focused on single genes and little attention
was directed to repetitive DNAs, and duplicated segments. Single-and few-copy sequences …

Comparison of the sequences of the D3 expansion of the 26S ribosomal genes reveals different degrees of heterogeneity in different populations and species of …

F De Luca, E Fanelli, M Di Vito, A Reyes… - European Journal of …, 2004 - Springer
Plant parasitic nematodes belonging to the genus Pratylenchus, also known as root lesion
nematodes, cause serious economic damage to different crop plants. In order to explore …

The 5S rDNA family evolves through concerted and birth-and-death evolution in fish genomes: an example from freshwater stingrays

D Pinhal, TS Yoshimura, CS Araki, C Martins - BMC Evolutionary Biology, 2011 - Springer
Background Ribosomal 5S genes are well known for the critical role they play in ribosome
folding and functionality. These genes are thought to evolve in a concerted fashion, with …

Genotoxic effects of cadmium chloride and azadirachtin treated singly and in combination in fish

P Chandra, AR Khuda-Bukhsh - Ecotoxicology and environmental safety, 2004 - Elsevier
The genotoxic effects of cadmium chloride (CdCl2) and azadirachtin (Aza) were assessed
singly and conjointly in a fish, Oreochromis mossambicus, with endpoints such as …

Chromosomal mapping of the major and minor ribosomal genes, (GATA)n and U2 snRNA gene by double-colour FISH in species of the Batrachoididae family

M Úbeda-Manzanaro, MA Merlo, JL Palazón, I Cross… - Genetica, 2010 - Springer
In the present study dual-colour fluorescence in situ hybridization (FISH) was performed to
study the chromosomal distribution of 18S and 5S rDNAs,(GATA) n and 5S rDNA, and U2 …