Whole-genome regression and prediction methods applied to plant and animal breeding

G de Los Campos, JM Hickey, R Pong-Wong… - Genetics, 2013 - academic.oup.com
Genomic-enabled prediction is becoming increasingly important in animal and plant
breeding and is also receiving attention in human genetics. Deriving accurate predictions of …

Predicting genetic predisposition in humans: the promise of whole-genome markers

G De Los Campos, D Gianola, DB Allison - Nature Reviews Genetics, 2010 - nature.com
Although genome-wide association studies have identified markers that are associated with
various human traits and diseases, our ability to predict such phenotypes remains limited. A …

Priors in whole-genome regression: the Bayesian alphabet returns

D Gianola - Genetics, 2013 - academic.oup.com
Whole-genome enabled prediction of complex traits has received enormous attention in
animal and plant breeding and is making inroads into human and even Drosophila genetics …

Prediction of genetic values of quantitative traits in plant breeding using pedigree and molecular markers

J Crossa, G Campos, P Pérez, D Gianola… - Genetics, 2010 - academic.oup.com
The availability of dense molecular markers has made possible the use of genomic selection
(GS) for plant breeding. However, the evaluation of models for GS in real plant populations …

Deregressing estimated breeding values and weighting information for genomic regression analyses

DJ Garrick, JF Taylor, RL Fernando - Genetics Selection Evolution, 2009 - Springer
Background Genomic prediction of breeding values involves a so-called training analysis
that predicts the influence of small genomic regions by regression of observed information …

Genomic evaluations with many more genotypes

PM VanRaden, JR O'Connell, GR Wiggans… - Genetics Selection …, 2011 - Springer
Abstract Background Genomic evaluations in Holstein dairy cattle have quickly become
more reliable over the last two years in many countries as more animals have been …

Comparison of single-trait and multiple-trait genomic prediction models

G Guo, F Zhao, Y Wang, Y Zhang, L Du, G Su - BMC genetics, 2014 - Springer
Background In this study, a single-trait genomic model (STGM) is compared with a multiple-
trait genomic model (MTGM) for genomic prediction using conventional estimated breeding …

Beyond missing heritability: prediction of complex traits

R Makowsky, NM Pajewski, YC Klimentidis… - PLoS …, 2011 - journals.plos.org
Despite rapid advances in genomic technology, our ability to account for phenotypic
variation using genetic information remains limited for many traits. This has unfortunately …

Genomic‐enabled prediction based on molecular markers and pedigree using the Bayesian linear regression package in R

P Pérez, G de Los Campos, J Crossa… - The plant …, 2010 - Wiley Online Library
The availability of dense molecular markers has made possible the use of genomic selection
in plant and animal breeding. However, models for genomic selection pose several …

Accuracy of genomic selection models in a large population of open-pollinated families in white spruce

J Beaulieu, T Doerksen, S Clément, J MacKay… - Heredity, 2014 - nature.com
Genomic selection (GS) is of interest in breeding because of its potential for predicting the
genetic value of individuals and increasing genetic gains per unit of time. To date, very few …