Nucleic acids with metal‐mediated base pairs and their applications

P Scharf, J Müller - ChemPlusChem, 2013 - Wiley Online Library
Metal‐mediated base pairs represent an elegant way for the site‐specific functionalisation of
nucleic acids. In this type of base pair, the hydrogen bonds between complementary …

Evidence for rod-shaped DNA-stabilized silver nanocluster emitters.

D Schultz, K Gardner, SS Oemrawsingh… - … (Deerfield Beach, Fla …, 2013 - europepmc.org
Fluorescent DNA-stabilized silver nanoclusters contain both cationic and neutral silver
atoms. The absorbance spectra of compositionally pure solutions follow the trend expected …

Silver (I) as DNA glue: Ag+-mediated guanine pairing revealed by removing Watson-Crick constraints

SM Swasey, LE Leal, O Lopez-Acevedo, J Pavlovich… - Scientific reports, 2015 - nature.com
Metal ion interactions with DNA have far-reaching implications in biochemistry and DNA
nanotechnology. Ag+ is uniquely interesting because it binds exclusively to the bases rather …

Efficient and sequence-independent replication of DNA containing a third base pair establishes a functional six-letter genetic alphabet

DA Malyshev, K Dhami, HT Quach… - Proceedings of the …, 2012 - National Acad Sciences
The natural four-letter genetic alphabet, comprised of just two base pairs (dA-dT and dG-
dC), is conserved throughout all life, and its expansion by the development of a third …

[HTML][HTML] Metal-mediated base pairs in parallel-stranded DNA

J Müller - Beilstein Journal of Organic Chemistry, 2017 - beilstein-journals.org
In nucleic acid chemistry, metal-mediated base pairs represent a versatile method for the
site-specific introduction of metal-based functionality. In metal-mediated base pairs, the …

Triplet Excimer Formation in a DNA Duplex with Silver Ion-Mediated Base Pairs

L Martínez-Fernández, FR Kohl, Y Zhang… - Journal of the …, 2024 - ACS Publications
The dynamics of excited electronic states in self-assembled structures formed between silver
(I) ions and cytosine-containing DNA strands or monomeric cytosine derivatives were …

A Highly Stabilizing Silver (I)‐Mediated Base Pair in Parallel‐Stranded DNA

I Sinha, C Fonseca Guerra… - Angewandte Chemie …, 2015 - Wiley Online Library
The first parallel‐stranded DNA duplex with Hoogsteen base pairing that readily
incorporates an Ag+ ion into an internal mispair to form a metal‐mediated base pair has …

The role of hydrogen bonds in the stabilization of silver-mediated cytosine tetramers

LA Espinosa Leal, A Karpenko, S Swasey… - The Journal of …, 2015 - ACS Publications
DNA oligomers can form silver-mediated duplexes, stable in gas phase and solution, with
potential for novel biomedical and technological applications. The nucleobase-metal bond …

Tug-of-war between DNA chelation and silver agglomeration in DNA–silver cluster chromophores

JT Petty, D Lewis, S Carnahan, D Kim… - The Journal of Physical …, 2022 - ACS Publications
Supramolecular chromophores form when a DNA traps silvers that then coalesce into
clusters with discrete, molecular electronic states. However, DNA strands are polymeric …

A QM/MM refinement of an experimental DNA structure with metal-mediated base pairs

S Kumbhar, S Johannsen, RKO Sigel, MP Waller… - Journal of inorganic …, 2013 - Elsevier
A series of hybrid quantum mechanical/molecular mechanical (QM/MM) calculations was
performed on models of a DNA duplex with artificial silver (I)-mediated imidazole base pairs …