[HTML][HTML] An introduction to topological data analysis: fundamental and practical aspects for data scientists

F Chazal, B Michel - Frontiers in artificial intelligence, 2021 - frontiersin.org
Topological Data Analysis (TDA) is a recent and fast growing field providing a set of new
topological and geometric tools to infer relevant features for possibly complex data. This …

A survey of vectorization methods in topological data analysis

D Ali, A Asaad, MJ Jimenez, V Nanda… - … on Pattern Analysis …, 2023 - ieeexplore.ieee.org
Attempts to incorporate topological information in supervised learning tasks have resulted in
the creation of several techniques for vectorizing persistent homology barcodes. In this …

The importance of the whole: topological data analysis for the network neuroscientist

AE Sizemore, JE Phillips-Cremins, R Ghrist… - Network …, 2019 - direct.mit.edu
Data analysis techniques from network science have fundamentally improved our
understanding of neural systems and the complex behaviors that they support. Yet the …

Topo-CXR: Chest X-ray TB and Pneumonia Screening with Topological Machine Learning

F Ahmed, B Nuwagira, F Torlak… - Proceedings of the …, 2023 - openaccess.thecvf.com
Examination of chest X-ray images is currently one of the most important methods for the
screening and diagnosis of thoracic diseases and, in some cases, for assessing response to …

Persistent homology of complex networks for dynamic state detection

A Myers, E Munch, FA Khasawneh - Physical Review E, 2019 - APS
In this paper we develop an alternative topological data analysis (TDA) approach for
studying graph representations of time series of dynamical systems. Specifically, we show …

Pllay: Efficient topological layer based on persistent landscapes

K Kim, J Kim, M Zaheer, J Kim… - Advances in …, 2020 - proceedings.neurips.cc
We propose PLLay, a novel topological layer for general deep learning models based on
persistence landscapes, in which we can efficiently exploit the underlying topological …

Persistence curves: A canonical framework for summarizing persistence diagrams

YM Chung, A Lawson - Advances in Computational Mathematics, 2022 - Springer
Persistence diagrams are one of the main tools in the field of Topological Data Analysis
(TDA). They contain fruitful information about the shape of data. The use of machine learning …

Finding cosmic voids and filament loops using topological data analysis

X Xu, J Cisewski-Kehe, SB Green, D Nagai - Astronomy and Computing, 2019 - Elsevier
We present a method called Significant Cosmic Holes in Universe (SCHU) for identifying
cosmic voids and loops of filaments in cosmological datasets and assigning their statistical …

On the effectiveness of persistent homology

R Turkes, GF Montufar, N Otter - Advances in Neural …, 2022 - proceedings.neurips.cc
Persistent homology (PH) is one of the most popular methods in Topological Data Analysis.
Even though PH has been used in many different types of applications, the reasons behind …

A persistent homology approach to heart rate variability analysis with an application to sleep-wake classification

YM Chung, CS Hu, YL Lo, HT Wu - Frontiers in physiology, 2021 - frontiersin.org
Persistent homology is a recently developed theory in the field of algebraic topology to study
shapes of datasets. It is an effective data analysis tool that is robust to noise and has been …