Clustering methods and their uses in computational chemistry
GM Downs, JM Barnard - Reviews in computational chemistry, 2002 - Wiley Online Library
Clustering is a data analysis technique that, when applied to a set of heterogeneous items,
identifies homogeneous subgroups as defined by a given model or measure of similarity. Of …
identifies homogeneous subgroups as defined by a given model or measure of similarity. Of …
Basic overview of chemoinformatics
T Engel - Journal of chemical information and modeling, 2006 - ACS Publications
There is no particular point in time that determines when chemoinformatics was founded or
established. It slowly evolved from several, often quite humble beginnings. Scientists in …
established. It slowly evolved from several, often quite humble beginnings. Scientists in …
Analysis and comparison of 2D fingerprints: insights into database screening performance using eight fingerprint methods
Virtual screening is a widely used strategy in modern drug discovery and 2D fingerprint
similarity is an important tool that has been successfully applied to retrieve active …
similarity is an important tool that has been successfully applied to retrieve active …
[引用][C] An Introduction to Chemoinformatics
AR Leach - 2007 - books.google.com
Chemoinformatics draws upon techniques from many disciplines including computer
science, mathematics, computational chemistry and data visualisation to tackle these …
science, mathematics, computational chemistry and data visualisation to tackle these …
Robustness of biological activity spectra predicting by computer program PASS for noncongeneric sets of chemical compounds
VV Poroikov, DA Filimonov, YV Borodina… - Journal of chemical …, 2000 - ACS Publications
The computer system PASS provides simultaneous prediction of several hundreds of
biological activity types for any drug-like compound. The prediction is based on the analysis …
biological activity types for any drug-like compound. The prediction is based on the analysis …
Selected concepts and investigations in compound classification, molecular descriptor analysis, and virtual screening
J Bajorath - Journal of chemical information and computer …, 2001 - ACS Publications
Compound classification and virtual screening methods are capable of exploring and
exploiting molecular similarity beyond chemistry, in accordance with the similar property …
exploiting molecular similarity beyond chemistry, in accordance with the similar property …
LINGO, an efficient holographic text based method to calculate biophysical properties and intermolecular similarities
D Vidal, M Thormann, M Pons - Journal of chemical information …, 2005 - ACS Publications
SMILES strings are the most compact text based molecular representations. Implicitly they
contain the information needed to compute all kinds of molecular structures and, thus …
contain the information needed to compute all kinds of molecular structures and, thus …
Clustering of high throughput gene expression data
High throughput biological data need to be processed, analyzed, and interpreted to address
problems in life sciences. Bioinformatics, computational biology, and systems biology deal …
problems in life sciences. Bioinformatics, computational biology, and systems biology deal …
A universal molecular descriptor system for prediction of logP, logS, logBB, and absorption
H Sun - Journal of chemical information and computer sciences, 2004 - ACS Publications
Predictive models for octanol/water partition coefficient (logP), aqueous solubility (logS),
blood-brain barrier (logBB), and human intestinal absorption (HIA) were built from a …
blood-brain barrier (logBB), and human intestinal absorption (HIA) were built from a …
New methodologies for ligand-based virtual screening
FL Stahura, J Bajorath - Current pharmaceutical design, 2005 - ingentaconnect.com
Computational screening of compound databases has become increasingly popular in
pharmaceutical research. Virtual screening approaches can roughly be divided into target …
pharmaceutical research. Virtual screening approaches can roughly be divided into target …