Plant organellar RNA editing: what 30 years of research has revealed

ID Small, M Schallenberg‐Rüdinger… - The Plant …, 2020 - Wiley Online Library
The central dogma in biology defines the flow of genetic information from DNA to RNA to
protein. Accordingly, RNA molecules generally accurately follow the sequences of the genes …

[HTML][HTML] RNA editing and its molecular mechanism in plant organelles

M Ichinose, M Sugita - Genes, 2016 - mdpi.com
RNA editing by cytidine (C) to uridine (U) conversions is widespread in plant mitochondria
and chloroplasts. In some plant taxa,“reverse” U-to-C editing also occurs. However, to date …

[HTML][HTML] Assembly and comparative analysis of the complete mitochondrial genome of Suaeda glauca

Y Cheng, X He, S Priyadarshani, Y Wang, L Ye, C Shi… - BMC genomics, 2021 - Springer
Background Suaeda glauca (S. glauca) is a halophyte widely distributed in saline and sandy
beaches, with strong saline-alkali tolerance. It is also admired as a landscape plant with …

C-to-U and U-to-C: RNA editing in plant organelles and beyond

V Knoop - Journal of Experimental Botany, 2023 - academic.oup.com
The genomes in the two energy-converting organelles of plant cells, chloroplasts and
mitochondria, contain numerous 'errors' that are corrected at the level of RNA transcript …

[HTML][HTML] Plant-type pentatricopeptide repeat proteins with a DYW domain drive C-to-U RNA editing in Escherichia coli

B Oldenkott, Y Yang, E Lesch, V Knoop… - Communications …, 2019 - nature.com
RNA editing converting cytidines into uridines is a hallmark of gene expression in land plant
chloroplasts and mitochondria. Pentatricopeptide repeat (PPR) proteins have a key role in …

[HTML][HTML] Assembly and comparative analysis of the complete mitochondrial genome of Bupleurum chinense DC

Y Qiao, X Zhang, Z Li, Y Song, Z Sun - BMC genomics, 2022 - Springer
Background Bupleurum chinense (B. chinense) is a plant that is widely distributed globally
and has strong pharmacological effects. Though the chloroplast (cp) genome of B. chinense …

Deepred-Mt: Deep representation learning for predicting C-to-U RNA editing in plant mitochondria

AA Edera, I Small, DH Milone… - Computers in Biology and …, 2021 - Elsevier
In land plant mitochondria, C-to-U RNA editing converts cytidines into uridines at highly
specific RNA positions called editing sites. This editing step is essential for the correct …

Plant mitochondrial RNA editing factors can perform targeted C-to-U editing of nuclear transcripts in human cells

E Lesch, MT Schilling, S Brenner, Y Yang… - Nucleic Acids …, 2022 - academic.oup.com
RNA editing processes are strikingly different in animals and plants. Up to thousands of
specific cytidines are converted into uridines in plant chloroplasts and mitochondria whereas …

Towards a plant model for enigmatic U‐to‐C RNA editing: the organelle genomes, transcriptomes, editomes and candidate RNA editing factors in the hornwort …

P Gerke, P Szövényi, A Neubauer, H Lenz… - New …, 2020 - Wiley Online Library
Hornworts are crucial to understand the phylogeny of early land plants. The emergence of
'reverse'U‐to‐C RNA editing accompanying the widespread C‐to‐U RNA editing in plant …

Applications of synthetic pentatricopeptide repeat proteins

F Kwok van der Giezen, S Honkanen… - Plant and Cell …, 2024 - academic.oup.com
RNA-binding proteins play integral roles in the regulation of essential processes in cells and
as such are attractive targets for engineering to manipulate gene expression at the RNA …