RNA modifications in cancer
Q Tang, L Li, Y Wang, P Wu, X Hou, J Ouyang… - British journal of …, 2023 - nature.com
Currently, more than 170 modifications have been identified on RNA. Among these RNA
modifications, various methylations account for two-thirds of total cases and exist on almost …
modifications, various methylations account for two-thirds of total cases and exist on almost …
2′-O-Methylation of ribosomal RNA: towards an epitranscriptomic control of translation?
PL Monaco, V Marcel, JJ Diaz, F Catez - Biomolecules, 2018 - mdpi.com
Ribosomal RNA (rRNA) undergoes post-transcriptional modification of over 200 nucleotides,
predominantly 2′-O-methylation (2′-O-Me). 2′-O-Methylation protects RNA from …
predominantly 2′-O-methylation (2′-O-Me). 2′-O-Methylation protects RNA from …
Locked nucleic acid (LNA) recognition of RNA: NMR solution structures of LNA: RNA hybrids
M Petersen, K Bondensgaard, J Wengel… - Journal of the …, 2002 - ACS Publications
Locked nucleic acids (LNAs) containing one or more 2 '-O, 4 '-C-methylene-linked bicyclic
ribonucleoside monomers possess a number of the prerequisites of an effective antisense …
ribonucleoside monomers possess a number of the prerequisites of an effective antisense …
Thermodynamics of Aminoglycoside− rRNA recognition: the binding of neomycin-class aminoglycosides to the A site of 16S rRNA
M Kaul, DS Pilch - Biochemistry, 2002 - ACS Publications
We use spectroscopic and calorimetric techniques to characterize the binding of the
aminoglycoside antibiotics neomycin, paromomycin, and ribostamycin to a RNA …
aminoglycoside antibiotics neomycin, paromomycin, and ribostamycin to a RNA …
X‐ray crystallographic analysis of the hydration of A‐and B‐form DNA at atomic resolution
M Egli, V Tereshko, M Teplova… - Biopolymers …, 1998 - Wiley Online Library
We have determined single crystal structures of an A‐DNA decamer and a B‐DNA
dodecamer at 0.83 and 0.95 Å, respectively. The resolution of the former is the highest …
dodecamer at 0.83 and 0.95 Å, respectively. The resolution of the former is the highest …
A critical survey of the structure-function of the antisense oligo/RNA heteroduplex as substrate for RNase H
E Zamaratski, PI Pradeepkumar… - Journal of biochemical …, 2001 - Elsevier
The aim of this review is to draw a correlation between the structure of the DNA/RNA hybrid
and its properties as a substrate for the RNase H, as well as to point the crucial structural …
and its properties as a substrate for the RNase H, as well as to point the crucial structural …
Solution Structure of an LNA Hybridized to DNA: NMR Study of the d(CTLGCTLTLCTLGC):d(GCAGAAGCAG) Duplex Containing Four Locked Nucleotides
We have used two-dimensional 1H NMR spectroscopy at 750 MHz to determine a high-
resolution solution structure of an oligonucleotide containing restricted nucleotides with a 2 ' …
resolution solution structure of an oligonucleotide containing restricted nucleotides with a 2 ' …
Interplay of LNA and 2′-O-Methyl RNA in the Structure and Thermodynamics of RNA Hybrid Systems: A Molecular Dynamics Study Using the Revised AMBER Force …
I Yildirim, E Kierzek, R Kierzek… - The journal of physical …, 2014 - ACS Publications
When used in nucleic acid duplexes, locked nucleic acid (LNA) and 2′-O-methyl RNA
residues enhance the duplex stabilities, and this makes it possible to create much better …
residues enhance the duplex stabilities, and this makes it possible to create much better …
Hydration of short DNA, RNA and 2′‐OMe oligonucleotides determined by osmotic stressing
E Rozners, J Moulder - Nucleic acids research, 2004 - academic.oup.com
Studies on hydration are important for better understanding of structure and function of
nucleic acids. We compared the hydration of self‐complementary DNA, RNA and 2′‐O …
nucleic acids. We compared the hydration of self‐complementary DNA, RNA and 2′‐O …
Post‐synthetic Spin‐Labeling of RNA through Click Chemistry for PELDOR Measurements
M Kerzhner, D Abdullin, J Więcek… - … A European Journal, 2016 - Wiley Online Library
Site‐directed spin labeling of RNA based on click chemistry is used in combination with
pulsed electron‐electron double resonance (PELDOR) to benchmark a nitroxide spin label …
pulsed electron‐electron double resonance (PELDOR) to benchmark a nitroxide spin label …