Leveraging artificial intelligence in the fight against infectious diseases
Despite advances in molecular biology, genetics, computation, and medicinal chemistry,
infectious disease remains an ominous threat to public health. Addressing the challenges …
infectious disease remains an ominous threat to public health. Addressing the challenges …
The importance of antimicrobial resistance in medical mycology
Prior to the SARS-CoV-2 pandemic, antibiotic resistance was listed as the major global
health care priority. Some analyses, including the O'Neill report, have predicted that deaths …
health care priority. Some analyses, including the O'Neill report, have predicted that deaths …
TTD: Therapeutic Target Database describing target druggability information
Y Zhou, Y Zhang, D Zhao, X Yu, X Shen… - Nucleic acids …, 2024 - academic.oup.com
Target discovery is one of the essential steps in modern drug development, and the
identification of promising targets is fundamental for developing first-in-class drug. A variety …
identification of promising targets is fundamental for developing first-in-class drug. A variety …
Confronting antifungal resistance, tolerance, and persistence: advances in drug target discovery and delivery systems
L Chen, L Zhang, Y Xie, Y Wang, X Tian, W Fang… - Advanced Drug Delivery …, 2023 - Elsevier
Human pathogenic fungi pose a serious threat to human health and safety. Unfortunately,
the limited number of antifungal options is exacerbated by the continuous emergence of …
the limited number of antifungal options is exacerbated by the continuous emergence of …
The role of Candida albicans stress response pathways in antifungal tolerance and resistance
Human fungal pathogens are the causative agents of devastating diseases across the
globe, and the increasing prevalence of drug resistance threatens to undermine the already …
globe, and the increasing prevalence of drug resistance threatens to undermine the already …
Respiration supports intraphagosomal filamentation and escape of Candida albicans from macrophages
NT Case, J Westman, MT Hallett, J Plumb, A Farheen… - Mbio, 2023 - Am Soc Microbiol
For the human fungal pathogen Candida albicans, metabolic flexibility and the ability to
transition between yeast and filamentous growth states are key virulence traits that enable …
transition between yeast and filamentous growth states are key virulence traits that enable …
[HTML][HTML] InParanoiDB 9: ortholog groups for protein domains and full-length proteins
E Persson, ELL Sonnhammer - Journal of Molecular Biology, 2023 - Elsevier
Prediction of orthologs is an important bioinformatics pursuit that is frequently used for
inferring protein function and evolutionary analyses. The InParanoid database is a well …
inferring protein function and evolutionary analyses. The InParanoid database is a well …
Integration of graph neural networks and genome-scale metabolic models for predicting gene essentiality
Genome-scale metabolic models are powerful tools for understanding cellular physiology.
Flux balance analysis (FBA), in particular, is an optimization-based approach widely …
Flux balance analysis (FBA), in particular, is an optimization-based approach widely …
Development and applications of a CRISPR activation system for facile genetic overexpression in Candida albicans
For the fungal pathogen Candida albicans, genetic overexpression readily occurs via a
diversity of genomic alterations, such as aneuploidy and gain-of-function mutations, with …
diversity of genomic alterations, such as aneuploidy and gain-of-function mutations, with …