UMLS-based data augmentation for natural language processing of clinical research literature

T Kang, A Perotte, Y Tang, C Ta… - Journal of the American …, 2021 - academic.oup.com
Objective The study sought to develop and evaluate a knowledge-based data augmentation
method to improve the performance of deep learning models for biomedical natural …

Zero-shot clinical acronym expansion via latent meaning cells

G Adams, M Ketenci, S Bhave… - … Learning for Health, 2020 - proceedings.mlr.press
Abstract We introduce Latent Meaning Cells, a deep latent variable model which learns
contextualized representations of words by combining local lexical context and metadata …

Automatically disambiguating medical acronyms with ontology-aware deep learning

M Skreta, A Arbabi, J Wang, E Drysdale, J Kelly… - Nature …, 2021 - nature.com
Modern machine learning (ML) technologies have great promise for automating diverse
clinical and research workflows; however, training them requires extensive hand-labelled …

A transformer-based neural network framework for full names prediction with abbreviations and contexts

Z Ye, S Li - Data & Knowledge Engineering, 2024 - Elsevier
With the rapid spread of information, abbreviations are used more and more common
because they are convenient. However, the duplication of abbreviations can lead to …

[HTML][HTML] Investigating the impact of weakly supervised data on text mining models of publication transparency: a case study on randomized controlled trials

L Hoanga, L Jiang, H Kilicoglu - AMIA Summits on Translational …, 2022 - ncbi.nlm.nih.gov
Lack of large quantities of annotated data is a major barrier in developing effective text
mining models of biomedical literature. In this study, we explored weak supervision to …

Leveraging small-bert and bio-bert for abbreviation identification in scientific text

P Miglani, P Vatsal, R Sharma - … on Applications of Natural Language to …, 2023 - Springer
Abbreviations are short forms of phrases that aid in the communication of long sentences in
texts and are an essential part of the writing process. Abbreviations save a lot of time and …

Findings on Ad Hoc Contractions

S Choi, K Taghva - Information, 2023 - mdpi.com
Abbreviations are often overlooked, since their frequency and acceptance are almost
second nature in everyday communication. Business names, handwritten notes, online …

A knowledge-based data augmentation framework for few-shot biomedical information extraction

X Su, C Cheng, K Yang, X Zhou - China Health Information Processing …, 2022 - Springer
There are a lot of biomedical knowledge hidden in the massive scientific clinical literature.
These knowledge exist in an unstructured form and is difficult to extract automatically …

Cross-Domain Abbreviation Disambiguation on Vietnamese Clinical Texts in Online Processing

C Vo, HP Nguyen - International Conference on Computational Collective …, 2024 - Springer
Readability of clinical texts in electronic medical records (EMRs) is more significant when
EMRs are shared and required to be understood by both human users and computer …

An Initial Study of Abbreviation Disambiguation in Vietnamese Clinical Texts

C Vo, P Nguyen - 2024 18th International Conference on …, 2024 - ieeexplore.ieee.org
Abbreviations are ubiquitously used in clinical texts of electronic medical records (EMRs) in
the world due to their record simplification when created under high pressure. However, they …