The application gap: Genomics for biodiversity and ecosystem service management

M Heuertz, SB Carvalho, J Galindo, B Rinkevich… - Biological …, 2023 - Elsevier
The conservation of biodiversity from the genetic to the community levels is fundamental for
the continual provision of ecosystem services (ES), the benefits that ecosystems provide to …

Conservation Genomics and Metagenomics of Giant and Red Pandas in the Wild

Y Hu, Y Hu, W Zhou, F Wei - Annual Review of Animal …, 2024 - annualreviews.org
Giant pandas and red pandas are endangered species with similar specialized bamboo diet
and partial sympatric distribution in China. Over the last two decades, the rapid development …

GenErode: a bioinformatics pipeline to investigate genome erosion in endangered and extinct species

VE Kutschera, M Kierczak, T van der Valk, J von Seth… - BMC …, 2022 - Springer
Background Many wild species have suffered drastic population size declines over the past
centuries, which have led to 'genomic erosion'processes characterized by reduced genetic …

First large‐scale quantification study of DNA preservation in insects from natural history collections using genome‐wide sequencing

VE Mullin, W Stephen, AN Arce, W Nash… - Methods in Ecology …, 2023 - Wiley Online Library
Insect declines are a global issue with significant ecological and economic ramifications.
Yet, we have a poor understanding of the genomic impact these losses can have. Genome …

Natural history collections as a resource for conservation genomics: Understanding the past to preserve the future

PM Benham, RCK Bowie - Journal of Heredity, 2023 - academic.oup.com
To avoid the worst outcomes of the current biodiversity crisis we need a deep understanding
of population responses to human-induced ecological change. Rapidly expanding access to …

Museomics

C Lalueza-Fox - Current Biology, 2022 - cell.com
Museo-what? Museomics! Museomics is emerging as a distinct discipline from ancient DNA
research and involves natural history museums and herbaria across the world. Museomics …

Shotgun metagenomics captures more microbial diversity than targeted 16S rRNA gene sequencing for field specimens and preserved museum specimens

JD Madison, BC LaBumbard, DC Woodhams - Plos one, 2023 - journals.plos.org
The use of museum specimens for research in microbial evolutionary ecology remains an
under-utilized investigative dimension with important potential. Despite this potential, there …

From historical expedition diaries to whole genome sequencing: a case study of the likely extinct Red Sea torpedo ray

A Palandačić, M Kapun, C Greve, T Schell… - Zoologica …, 2024 - Wiley Online Library
Abstract Torpedo rays (Torpedinidae, Torpediniformes) are small to moderately large
batoids that produce an electric discharge. They are distributed worldwide in temperate and …

Genomic Analyses of Wild and Cultivated Bacanora Agave (Agave angustifolia var. pacifica) Reveal Inbreeding, Few Signs of Cultivation History and Shallow …

A Klimova, KY Ruiz Mondragón, F Molina Freaner… - Plants, 2022 - mdpi.com
Due to the recent increase in demand for agave-based beverages, many wild agave
populations have experienced rapid decline and fragmentation, whereas cultivated plants …

Museomics provides insights into conservation and education: The instance of an African lion specimen from the Museum of Zoology “Pietro Doderlein”

E Cilli, F Fontani, MM Ciucani, M Pizzuto… - Diversity, 2023 - mdpi.com
Innovative technological approaches are crucial to enhance naturalistic museum collections
and develop information repositories of relevant interest to science, such as threatened …