Inflammation, epigenetics, and metabolism converge to cell senescence and ageing: the regulation and intervention

X Zhu, Z Chen, W Shen, G Huang, JM Sedivy… - Signal transduction and …, 2021 - nature.com
Remarkable progress in ageing research has been achieved over the past decades.
General perceptions and experimental evidence pinpoint that the decline of physical …

DNA methylation pathways and their crosstalk with histone methylation

J Du, LM Johnson, SE Jacobsen… - Nature reviews Molecular …, 2015 - nature.com
Methylation of DNA and of histone 3 at Lys 9 (H3K9) are highly correlated with gene
silencing in eukaryotes from fungi to humans. Both of these epigenetic marks need to be …

Diverse silent chromatin states modulate genome compartmentalization and loop extrusion barriers

G Spracklin, N Abdennur, M Imakaev… - Nature structural & …, 2023 - nature.com
The relationships between chromosomal compartmentalization, chromatin state and function
are poorly understood. Here by profiling long-range contact frequencies in HCT116 colon …

[HTML][HTML] Understanding the relationship between DNA methylation and histone lysine methylation

NR Rose, RJ Klose - Biochimica et Biophysica Acta (BBA)-Gene Regulatory …, 2014 - Elsevier
DNA methylation acts as an epigenetic modification in vertebrate DNA. Recently it has
become clear that the DNA and histone lysine methylation systems are highly interrelated …

DNA methylation: superior or subordinate in the epigenetic hierarchy?

B Jin, Y Li, KD Robertson - Genes & cancer, 2011 - journals.sagepub.com
Epigenetic modifications are heritable changes in gene expression not encoded by the DNA
sequence. In the past decade, great strides have been made in characterizing epigenetic …

Cellular senescence in cancer: from mechanisms to detection

HL Ou, R Hoffmann, C González‐López… - Molecular …, 2021 - Wiley Online Library
Senescence refers to a cellular state featuring a stable cell‐cycle arrest triggered in
response to stress. This response also involves other distinct morphological and intracellular …

Linking DNA methylation and histone modification: patterns and paradigms

H Cedar, Y Bergman - Nature Reviews Genetics, 2009 - nature.com
Both DNA methylation and histone modification are involved in establishing patterns of gene
repression during development. Certain forms of histone methylation cause local formation …

Specific or not specific recruitment of DNMTs for DNA methylation, an epigenetic dilemma

E Hervouet, P Peixoto, R Delage-Mourroux… - Clinical …, 2018 - Springer
Our current view of DNA methylation processes is strongly moving: First, even if it was
generally admitted that DNMT3A and DNMT3B are associated with de novo methylation and …

Rethinking how DNA methylation patterns are maintained

PA Jones, G Liang - Nature Reviews Genetics, 2009 - nature.com
DNA methylation patterns are set up early in mammalian development and are then copied
during the division of somatic cells. A long-established model for the maintenance of these …

Regulation and function of DNA methylation in plants and animals

XJ He, T Chen, JK Zhu - Cell research, 2011 - nature.com
DNA methylation is an important epigenetic mark involved in diverse biological processes.
In plants, DNA methylation can be established through the RNA-directed DNA methylation …