Hypergraph models of biological networks to identify genes critical to pathogenic viral response
Background Representing biological networks as graphs is a powerful approach to reveal
underlying patterns, signatures, and critical components from high-throughput biomolecular …
underlying patterns, signatures, and critical components from high-throughput biomolecular …
Higher-order networks representation and learning: A survey
H Tian, R Zafarani - ACM SIGKDD Explorations Newsletter, 2024 - dl.acm.org
Network data has become widespread, larger, and more complex over the years. Traditional
network data is dyadic, capturing the relations among pairs of entities. With the need to …
network data is dyadic, capturing the relations among pairs of entities. With the need to …
An open source knowledge graph ecosystem for the life sciences
Translational research requires data at multiple scales of biological organization.
Advancements in sequencing and multi-omics technologies have increased the availability …
Advancements in sequencing and multi-omics technologies have increased the availability …
[HTML][HTML] Hypergraph-based analysis and design of intelligent collaborative manufacturing space
A method for hypergraph-based analysis and the design of manufacturing systems has been
developed. The reason for its development is the need to integrate the human workforce into …
developed. The reason for its development is the need to integrate the human workforce into …
Class of models for random hypergraphs
M Barthelemy - Physical Review E, 2022 - APS
Despite the recently exhibited importance of higher-order interactions for various processes,
few flexible (null) models are available. In particular, most studies on hypergraphs focus on …
few flexible (null) models are available. In particular, most studies on hypergraphs focus on …
The simpliciality of higher-order networks
Higher-order networks are widely used to describe complex systems in which interactions
can involve more than two entities at once. In this paper, we focus on inclusion within higher …
can involve more than two entities at once. In this paper, we focus on inclusion within higher …
Ollivier Ricci curvature of directed hypergraphs
M Eidi, J Jost - Scientific Reports, 2020 - nature.com
Many empirical networks incorporate higher order relations between elements and therefore
are naturally modelled as, possibly directed and/or weighted, hypergraphs, rather than …
are naturally modelled as, possibly directed and/or weighted, hypergraphs, rather than …
Attributed Stream Hypergraphs: temporal modeling of node-attributed high-order interactions
Recent advances in network science have resulted in two distinct research directions aimed
at augmenting and enhancing representations for complex networks. The first direction, that …
at augmenting and enhancing representations for complex networks. The first direction, that …
Topological analysis of temporal hypergraphs
In this work we study the topological properties of temporal hypergraphs. Hypergraphs
provide a higher dimensional generalization of a graph that is capable of capturing multi …
provide a higher dimensional generalization of a graph that is capable of capturing multi …