Genomic exploration of coral-associated bacteria: identifying probiotic candidates to increase coral bleaching resilience in Galaxea fascicularis

T Doering, K Tandon, SH Topa, SJ Pidot, LL Blackall… - Microbiome, 2023 - Springer
Background Reef-building corals are acutely threatened by ocean warming, calling for
active interventions to reduce coral bleaching and mortality. Corals associate with a wide …

Hydrodynamic disturbance controls microbial community assembly and biogeochemical processes in coastal sediments

YJ Chen, PM Leung, PLM Cook, WW Wong… - The ISME …, 2022 - academic.oup.com
The microbial community composition and biogeochemical dynamics of coastal permeable
(sand) sediments differs from cohesive (mud) sediments. Tide-and wave-driven …

Application of the isotope pairing technique in sediments: use, challenges, and new directions

EK Robertson, M Bartoli, V Brüchert… - Limnology and …, 2019 - Wiley Online Library
Determining accurate rates of benthic nitrogen (N) removal and retention pathways from
diverse environments is critical to our understanding of process distribution and constructing …

Bacterial fermentation and respiration processes are uncoupled in anoxic permeable sediments

AJ Kessler, YJ Chen, DW Waite, T Hutchinson… - Nature …, 2019 - nature.com
Permeable (sandy) sediments cover half of the continental margin and are major regulators
of oceanic carbon cycling. The microbial communities within these highly dynamic …

Simultaneous sulfate and nitrate reduction in coastal sediments

OM Bourceau, T Ferdelman, G Lavik… - ISME …, 2023 - academic.oup.com
The oscillating redox conditions that characterize coastal sandy sediments foster microbial
communities capable of respiring oxygen and nitrate simultaneously, thereby increasing the …

[HTML][HTML] Learning from microorganisms: using new insights in microbial physiology for sustainable nitrogen management

P Garrido-Amador, M Kniaziuk, B Vekeman… - Current Opinion in …, 2021 - Elsevier
Highlights•To reduce nitrate to N 2 distinct nitrogen-oxide-reducing microorganisms function
together.•Detecting nirS, nirK or narG genes cannot be directly linked to NO and N 2 O …

Taxonomic and functional profiling of nitrifying biofilms in freshwater, brackish and marine RAS biofilters

J Hüpeden, B Wemheuer, D Indenbirken… - Aquacultural …, 2020 - Elsevier
In recirculating aquaculture systems (RAS), the crucial step of eliminating toxic N
compounds like ammonia and nitrite is mediated via nitrifying microorganisms and takes …

Estuarine microbial diversity and nitrogen cycling increase along sand–mud gradients independent of salinity and distance

JS Boey, R Mortimer, A Couturier… - Environmental …, 2022 - Wiley Online Library
Estuaries are depositional environments prone to terrigenous mud sedimentation. While
macrofaunal diversity and nitrogen retention are greatly affected by changes in sedimentary …

Microbial nitrogen loss by coupled nitrification to denitrification and anammox in a permeable subterranean estuary at Gloucester Point, Virginia

J Wu, Y Hong, SJ Wilson, B Song - Marine pollution bulletin, 2021 - Elsevier
The nitrogen (N) loss processes have not been well examined in subterranean estuaries
(STEs) between land and sea. We utilized a 15 N isotope tracer method, q-PCR, and high …

Mechanistic insights into polyhydroxyalkanoate-enhanced denitrification capacity of microbial community: Evolution of community structure and intracellular electron …

K Ding, L Xu, Y Chen, W Li, X Chai, X Dai… - Science of The Total …, 2023 - Elsevier
Denitrification is the key driving force of nitrogen cycle in surface water and plays an
important role in eutrophication water remediation. Compared with some other common …