Microbial diversity in extreme environments

WS Shu, LN Huang - Nature Reviews Microbiology, 2022 - nature.com
A wide array of microorganisms, including many novel, phylogenetically deeply rooted taxa,
survive and thrive in extreme environments. These unique and reduced-complexity …

[HTML][HTML] Phylum Gemmatimonadota and its role in the environment

I Mujakić, K Piwosz, M Koblížek - Microorganisms, 2022 - mdpi.com
Bacteria are an important part of every ecosystem that they inhabit on Earth. Environmental
microbiologists usually focus on a few dominant bacterial groups, neglecting less abundant …

[HTML][HTML] A genomic catalog of Earth's microbiomes

S Nayfach, S Roux, R Seshadri, D Udwary… - Nature …, 2021 - nature.com
The reconstruction of bacterial and archaeal genomes from shotgun metagenomes has
enabled insights into the ecology and evolution of environmental and host-associated …

Insight into the function and evolution of the Wood–Ljungdahl pathway in Actinobacteria

JY Jiao, L Fu, ZS Hua, L Liu, N Salam, PF Liu… - The ISME …, 2021 - academic.oup.com
Carbon fixation by chemoautotrophic microbes such as homoacetogens had a major impact
on the transition from the inorganic to the organic world. Recent reports have shown the …

[HTML][HTML] The economical lifestyle of CPR bacteria in groundwater allows little preference for environmental drivers

NM Chaudhari, WA Overholt… - Environmental …, 2021 - Springer
Abstract Background The highly diverse Cand. Patescibacteria are predicted to have
minimal biosynthetic and metabolic pathways, which hinders understanding of how their …

[HTML][HTML] A shared core microbiome in soda lakes separated by large distances

JK Zorz, C Sharp, M Kleiner, PMK Gordon… - Nature …, 2019 - nature.com
In alkaline soda lakes, concentrated dissolved carbonates establish productive phototrophic
microbial mats. Here we show how microbial phototrophs and autotrophs contribute to this …

Multi-environment ecogenomics analysis of the cosmopolitan phylum Gemmatimonadota

I Mujakić, PJ Cabello-Yeves… - Microbiology …, 2023 - Am Soc Microbiol
Gemmatimonadota is a diverse bacterial phylum commonly found in environments such as
soils, rhizospheres, fresh waters, and sediments. So far, the phylum contains just six cultured …

Microbiome of the deep Lake Baikal, a unique oxic bathypelagic habitat

PJ Cabello‐Yeves, TI Zemskaya… - Limnology and …, 2020 - Wiley Online Library
Lake Baikal is the deepest lake in the world. Its depth provides the only bathypelagic (>
1000 m deep) freshwater habitat on Earth and its oxic, ultra‐oligotrophic features make it a …

[HTML][HTML] Trait biases in microbial reference genomes

S Albright, S Louca - Scientific Data, 2023 - nature.com
Common culturing techniques and priorities bias our discovery towards specific traits that
may not be representative of microbial diversity in nature. So far, these biases have not been …

[HTML][HTML] Functional differentiation determines the molecular basis of the symbiotic lifestyle of Ca. Nanohaloarchaeota

YG Xie, ZH Luo, BZ Fang, JY Jiao, QJ Xie, XR Cao… - Microbiome, 2022 - Springer
Abstract Background Candidatus Nanohaloarchaeota, an archaeal phylum within the
DPANN superphylum, is characterized by limited metabolic capabilities and limited …