Intrinsically disordered proteins from A to Z
VN Uversky - The international journal of biochemistry & cell biology, 2011 - Elsevier
The ideas that proteins might possess specific functions without being uniquely folded into
rigid 3D-structures and that these floppy polypeptides might constitute a noticeable part of …
rigid 3D-structures and that these floppy polypeptides might constitute a noticeable part of …
Rational approaches to improving selectivity in drug design
Appropriate tuning of binding selectivity is a primary objective in the discovery and
optimization of a compound on the path toward developing a drug. The environment in …
optimization of a compound on the path toward developing a drug. The environment in …
DeepAffinity: interpretable deep learning of compound–protein affinity through unified recurrent and convolutional neural networks
Motivation Drug discovery demands rapid quantification of compound–protein interaction
(CPI). However, there is a lack of methods that can predict compound–protein affinity from …
(CPI). However, there is a lack of methods that can predict compound–protein affinity from …
Intrinsic disorder and protein function
The dominant view of protein structure-function is that an amino acid sequence specifies a
three-dimensional (3-D) structure that is a prerequisite for protein function. In contrast, many …
three-dimensional (3-D) structure that is a prerequisite for protein function. In contrast, many …
Role of the active-site solvent in the thermodynamics of factor Xa ligand binding
Understanding the underlying physics of the binding of small-molecule ligands to protein
active sites is a key objective of computational chemistry and biology. It is widely believed …
active sites is a key objective of computational chemistry and biology. It is widely believed …
Protease inhibitors: current status and future prospects
D Leung, G Abbenante, DP Fairlie - Journal of medicinal chemistry, 2000 - ACS Publications
The four major classes of protease enzymes1-4 (aspartic, serine, cysteine, and metallo)
selectively catalyze the hydrolysis of polypeptide bonds. Their control over protein synthesis …
selectively catalyze the hydrolysis of polypeptide bonds. Their control over protein synthesis …
Exposure of platelet membrane phosphatidylserine regulates blood coagulation
BR Lentz - Progress in lipid research, 2003 - Elsevier
This article addresses the role of platelet membrane phosphatidylserine (PS) in regulating
the production of thrombin, the central regulatory molecule of blood coagulation. PS is …
the production of thrombin, the central regulatory molecule of blood coagulation. PS is …
Rapid and general profiling of protease specificity by using combinatorial fluorogenic substrate libraries
JL Harris, BJ Backes, F Leonetti… - Proceedings of the …, 2000 - National Acad Sciences
A method is presented for the preparation and use of fluorogenic peptide substrates that
allows for the configuration of general substrate libraries to rapidly identify the primary and …
allows for the configuration of general substrate libraries to rapidly identify the primary and …
Discovery of the Novel Antithrombotic Agent 5-Chloro-N-({(5S)-2-oxo-3- [4-(3-oxomorpholin-4-yl)phenyl]-1,3-oxazolidin-5-yl}methyl)thiophene- 2-carboxamide (BAY …
S Roehrig, A Straub, J Pohlmann… - Journal of medicinal …, 2005 - ACS Publications
Despite recent progress in antithrombotic therapy, there is still an unmet medical need for
safe and orally available anticoagulants. The coagulation enzyme Factor Xa (FXa) is a …
safe and orally available anticoagulants. The coagulation enzyme Factor Xa (FXa) is a …
TFPI is a colonic crypt receptor for TcdB from hypervirulent clade 2 C. difficile
The emergence of hypervirulent clade 2 Clostridioides difficile is associated with severe
symptoms and accounts for> 20% of global infections. TcdB is a dominant virulence factor of …
symptoms and accounts for> 20% of global infections. TcdB is a dominant virulence factor of …