The emergence of modularity in biological systems
DM Lorenz, A Jeng, MW Deem - Physics of life reviews, 2011 - Elsevier
In this review, we discuss modularity and hierarchy in biological systems. We review
examples from protein structure, genetics, and biological networks of modular partitioning of …
examples from protein structure, genetics, and biological networks of modular partitioning of …
The robustness and innovability of protein folds
A Toth-Petroczy, DS Tawfik - Current opinion in structural biology, 2014 - Elsevier
Highlights•Robustness relates to mutations having minimal effects on structure and
function.•Innovability means that beneficial functional changes are induced by few …
function.•Innovability means that beneficial functional changes are induced by few …
The evolution of phenotypic correlations and “developmental memory”
Abstract Development introduces structured correlations among traits that may constrain or
bias the distribution of phenotypes produced. Moreover, when suitable heritable variation …
bias the distribution of phenotypes produced. Moreover, when suitable heritable variation …
How evolution learns to generalise: Using the principles of learning theory to understand the evolution of developmental organisation
One of the most intriguing questions in evolution is how organisms exhibit suitable
phenotypic variation to rapidly adapt in novel selective environments. Such variability is …
phenotypic variation to rapidly adapt in novel selective environments. Such variability is …
The collective intelligence of evolution and development
Collective intelligence and individual intelligence are usually considered to be
fundamentally different. Individual intelligence is uncontroversial. It occurs in organisms with …
fundamentally different. Individual intelligence is uncontroversial. It occurs in organisms with …
Evolution of bow-tie architectures in biology
Bow-tie or hourglass structure is a common architectural feature found in many biological
systems. A bow-tie in a multi-layered structure occurs when intermediate layers have much …
systems. A bow-tie in a multi-layered structure occurs when intermediate layers have much …
Evolutionary connectionism: algorithmic principles underlying the evolution of biological organisation in evo-devo, evo-eco and evolutionary transitions
The mechanisms of variation, selection and inheritance, on which evolution by natural
selection depends, are not fixed over evolutionary time. Current evolutionary biology is …
selection depends, are not fixed over evolutionary time. Current evolutionary biology is …
A spectrum of modularity in multi‐functional gene circuits
A Jiménez, J Cotterell, A Munteanu… - Molecular systems …, 2017 - embopress.org
A major challenge in systems biology is to understand the relationship between a circuit's
structure and its function, but how is this relationship affected if the circuit must perform …
structure and its function, but how is this relationship affected if the circuit must perform …
Evolution of networks for body plan patterning; interplay of modularity, robustness and evolvability
KH Ten Tusscher, P Hogeweg - PLoS computational biology, 2011 - journals.plos.org
A major goal of evolutionary developmental biology (evo-devo) is to understand how
multicellular body plans of increasing complexity have evolved, and how the corresponding …
multicellular body plans of increasing complexity have evolved, and how the corresponding …
Rapid transition towards the division of labor via evolution of developmental plasticity
S Gavrilets - PLoS computational biology, 2010 - journals.plos.org
A crucial step in several major evolutionary transitions is the division of labor between
components of the emerging higher-level evolutionary unit. Examples include the separation …
components of the emerging higher-level evolutionary unit. Examples include the separation …