Innovations to culturing the uncultured microbial majority

WH Lewis, G Tahon, P Geesink, DZ Sousa… - Nature Reviews …, 2021 - nature.com
Despite the surge of microbial genome data, experimental testing is important to confirm
inferences about the cell biology, ecological roles and evolution of microorganisms. As the …

Multifaceted interactions between endophytes and plant: developments and prospects

E Khare, J Mishra, NK Arora - Frontiers in microbiology, 2018 - frontiersin.org
Microbial endophytes are present in all known plant species. The ability to enter and thrive
in the plant tissues makes endophytes unique, showing multidimensional interactions within …

A global atlas of the dominant bacteria found in soil

M Delgado-Baquerizo, AM Oliverio, TE Brewer… - Science, 2018 - science.org
The immense diversity of soil bacterial communities has stymied efforts to characterize
individual taxa and document their global distributions. We analyzed soils from 237 …

Soil bacterial networks are less stable under drought than fungal networks

FT de Vries, RI Griffiths, M Bailey, H Craig… - Nature …, 2018 - nature.com
Soil microbial communities play a crucial role in ecosystem functioning, but it is unknown
how co-occurrence networks within these communities respond to disturbances such as …

Embracing the unknown: disentangling the complexities of the soil microbiome

N Fierer - Nature Reviews Microbiology, 2017 - nature.com
Soil microorganisms are clearly a key component of both natural and managed ecosystems.
Despite the challenges of surviving in soil, a gram of soil can contain thousands of individual …

Endophytes and their potential in biotic stress management and crop production

P Chaudhary, U Agri, A Chaudhary, A Kumar… - Frontiers in …, 2022 - frontiersin.org
Biotic stress is caused by harmful microbes that prevent plants from growing normally and
also having numerous negative effects on agriculture crops globally. Many biotic factors …

A social niche breadth score reveals niche range strategies of generalists and specialists

FAB von Meijenfeldt, P Hogeweg… - Nature Ecology & Evolution, 2023 - nature.com
Generalists can survive in many environments, whereas specialists are restricted to a single
environment. Although a classical concept in ecology, niche breadth has remained …

Biophysical processes supporting the diversity of microbial life in soil

R Tecon, D Or - FEMS microbiology reviews, 2017 - academic.oup.com
Soil, the living terrestrial skin of the Earth, plays a central role in supporting life and is home
to an unimaginable diversity of microorganisms. This review explores key drivers for …

Phylogenetic background and habitat drive the genetic diversification of Escherichia coli

M Touchon, A Perrin, JAM De Sousa, B Vangchhia… - PLoS …, 2020 - journals.plos.org
Escherichia coli is mostly a commensal of birds and mammals, including humans, where it
can act as an opportunistic pathogen. It is also found in water and sediments. We …

Bacterial endophytes: The hidden actor in plant immune responses against biotic stress

N Oukala, K Aissat, V Pastor - Plants, 2021 - mdpi.com
Bacterial endophytes constitute an essential part of the plant microbiome and are described
to promote plant health by different mechanisms. The close interaction with the host leads to …