FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices
Single-molecule FRET (smFRET) has become a mainstream technique for studying
biomolecular structural dynamics. The rapid and wide adoption of smFRET experiments by …
biomolecular structural dynamics. The rapid and wide adoption of smFRET experiments by …
Recent advances in atomic molecular dynamics simulation of intrinsically disordered proteins
W Wang - Physical Chemistry Chemical Physics, 2021 - pubs.rsc.org
Intrinsically disordered proteins (IDPs) play important roles in cellular functions. The inherent
structural heterogeneity of IDPs makes the high-resolution experimental characterization of …
structural heterogeneity of IDPs makes the high-resolution experimental characterization of …
Unstructural biology of TRP ion channels: the role of intrinsically disordered regions in channel function and regulation
B Goretzki, C Guhl, F Tebbe, JM Harder… - Journal of Molecular …, 2021 - Elsevier
The first genuine high-resolution single particle cryo-electron microscopy structure of a
membrane protein determined was a transient receptor potential (TRP) ion channel, TRPV1 …
membrane protein determined was a transient receptor potential (TRP) ion channel, TRPV1 …
Intrinsically disordered proteins in chronic diseases
P Kulkarni, VN Uversky - Biomolecules, 2019 - mdpi.com
It is now increasingly evident that a large fraction of the human proteome comprises proteins
that, under physiological conditions, lack fixed, ordered 3D structures as a whole or have …
that, under physiological conditions, lack fixed, ordered 3D structures as a whole or have …
Combined prediction and design reveals the target recognition mechanism of an intrinsically disordered protein interaction domain
X Hu, Y Xu, C Wang, Y Liu, L Zhang… - Proceedings of the …, 2023 - National Acad Sciences
An increasing number of protein interaction domains and their targets are being found to be
intrinsically disordered proteins (IDPs). The corresponding target recognition mechanisms …
intrinsically disordered proteins (IDPs). The corresponding target recognition mechanisms …
Dynamic multivalent interactions of intrinsically disordered proteins
J Weng, W Wang - Current Opinion in Structural Biology, 2020 - Elsevier
Highlights•Multivalent interactions of intrinsically disordered proteins (IDP) are highly
dynamic, leading to complex binding thermodynamics and kinetics and various functional …
dynamic, leading to complex binding thermodynamics and kinetics and various functional …
[HTML][HTML] Studies on molecular dynamics of intrinsically disordered proteins and their fuzzy complexes: a mini-review
K Kasahara, H Terazawa, T Takahashi… - Computational and …, 2019 - Elsevier
The molecular dynamics (MD) method is a promising approach toward elucidating the
molecular mechanisms of intrinsically disordered regions (IDRs) of proteins and their fuzzy …
molecular mechanisms of intrinsically disordered regions (IDRs) of proteins and their fuzzy …
Highly charged proteins and their repulsive interactions antagonize biomolecular condensation
Biomolecular condensation is involved in various cellular processes; therefore, regulation of
condensation is crucial to prevent deleterious protein aggregation and maintain a stable …
condensation is crucial to prevent deleterious protein aggregation and maintain a stable …
The importance of the compact disordered state in the fuzzy interactions between intrinsically disordered proteins
The intrinsically disordered C-terminal domain (CTD) of protein 4.1 G is able to specifically
bind a 26-residue intrinsically disordered region of NuMA, forming a dynamic fuzzy complex …
bind a 26-residue intrinsically disordered region of NuMA, forming a dynamic fuzzy complex …
Disordered regions tune order in chromatin organization and function
Intrinsically disordered proteins or hybrid proteins with ordered domains and disordered
regions (both collectively designated as IDP (R) s) defy the well-established structure …
regions (both collectively designated as IDP (R) s) defy the well-established structure …