The divided bacterial genome: structure, function, and evolution
GC Dicenzo, TM Finan - Microbiology and Molecular Biology …, 2017 - Am Soc Microbiol
Approximately 10% of bacterial genomes are split between two or more large DNA
fragments, a genome architecture referred to as a multipartite genome. This multipartite …
fragments, a genome architecture referred to as a multipartite genome. This multipartite …
[HTML][HTML] The life of an insect endosymbiont from the cradle to the grave
Host-beneficial endosymbioses, which are formed when a microorganism takes up
residence inside another cell and provides a fitness advantage to the host, have had a …
residence inside another cell and provides a fitness advantage to the host, have had a …
[HTML][HTML] Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria
A Hördt, MG López, JP Meier-Kolthoff… - Frontiers in …, 2020 - frontiersin.org
The class Alphaproteobacteria is comprised of a diverse assemblage of Gram-negative
bacteria that includes organisms of varying morphologies, physiologies and habitat …
bacteria that includes organisms of varying morphologies, physiologies and habitat …
Genome content predicts the carbon catabolic preferences of heterotrophic bacteria
Heterotrophic bacteria—bacteria that utilize organic carbon sources—are taxonomically and
functionally diverse across environments. It is challenging to map metabolic interactions and …
functionally diverse across environments. It is challenging to map metabolic interactions and …
[HTML][HTML] Genome-Based Taxonomic Classification of the Phylum Actinobacteria
The application of phylogenetic taxonomic procedures led to improvements in the
classification of bacteria assigned to the phylum Actinobacteria but even so there remains a …
classification of bacteria assigned to the phylum Actinobacteria but even so there remains a …
[HTML][HTML] Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes
M García-López, JP Meier-Kolthoff, BJ Tindall… - Frontiers in …, 2019 - frontiersin.org
Although considerable progress has been made in recent years regarding the classification
of bacteria assigned to the phylum Bacteroidetes, there remains a need to further clarify …
of bacteria assigned to the phylum Bacteroidetes, there remains a need to further clarify …
[HTML][HTML] Pyropia yezoensis genome reveals diverse mechanisms of carbon acquisition in the intertidal environment
D Wang, X Yu, K Xu, G Bi, M Cao, E Zelzion… - Nature …, 2020 - nature.com
Abstract Changes in atmospheric CO2 concentration have played a central role in algal and
plant adaptation and evolution. The commercially important red algal genus, Pyropia …
plant adaptation and evolution. The commercially important red algal genus, Pyropia …
[HTML][HTML] A positive correlation between GC content and growth temperature in prokaryotes
EZ Hu, XR Lan, ZL Liu, J Gao, DK Niu - BMC genomics, 2022 - Springer
Background GC pairs are generally more stable than AT pairs; GC-rich genomes were
proposed to be more adapted to high temperatures than AT-rich genomes. Previous studies …
proposed to be more adapted to high temperatures than AT-rich genomes. Previous studies …
Evolutionary determinants of genome-wide nucleotide composition
One of the long-standing mysteries of evolutionary genomics is the source of the wide
phylogenetic diversity in genome nucleotide composition (G+ C versus A+ T), which must be …
phylogenetic diversity in genome nucleotide composition (G+ C versus A+ T), which must be …
[HTML][HTML] Rokubacteria: genomic giants among the uncultured bacterial phyla
Recent advances in single-cell genomic and metagenomic techniques have facilitated the
discovery of numerous previously unknown, deep branches of the tree of life that lack …
discovery of numerous previously unknown, deep branches of the tree of life that lack …