The divided bacterial genome: structure, function, and evolution

GC Dicenzo, TM Finan - Microbiology and Molecular Biology …, 2017 - Am Soc Microbiol
Approximately 10% of bacterial genomes are split between two or more large DNA
fragments, a genome architecture referred to as a multipartite genome. This multipartite …

[HTML][HTML] The life of an insect endosymbiont from the cradle to the grave

JP McCutcheon, BM Boyd, C Dale - Current Biology, 2019 - cell.com
Host-beneficial endosymbioses, which are formed when a microorganism takes up
residence inside another cell and provides a fitness advantage to the host, have had a …

[HTML][HTML] Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria

A Hördt, MG López, JP Meier-Kolthoff… - Frontiers in …, 2020 - frontiersin.org
The class Alphaproteobacteria is comprised of a diverse assemblage of Gram-negative
bacteria that includes organisms of varying morphologies, physiologies and habitat …

Genome content predicts the carbon catabolic preferences of heterotrophic bacteria

M Gralka, S Pollak, OX Cordero - Nature Microbiology, 2023 - nature.com
Heterotrophic bacteria—bacteria that utilize organic carbon sources—are taxonomically and
functionally diverse across environments. It is challenging to map metabolic interactions and …

[HTML][HTML] Genome-Based Taxonomic Classification of the Phylum Actinobacteria

I Nouioui, L Carro, M García-López… - Frontiers in …, 2018 - frontiersin.org
The application of phylogenetic taxonomic procedures led to improvements in the
classification of bacteria assigned to the phylum Actinobacteria but even so there remains a …

[HTML][HTML] Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes

M García-López, JP Meier-Kolthoff, BJ Tindall… - Frontiers in …, 2019 - frontiersin.org
Although considerable progress has been made in recent years regarding the classification
of bacteria assigned to the phylum Bacteroidetes, there remains a need to further clarify …

[HTML][HTML] Pyropia yezoensis genome reveals diverse mechanisms of carbon acquisition in the intertidal environment

D Wang, X Yu, K Xu, G Bi, M Cao, E Zelzion… - Nature …, 2020 - nature.com
Abstract Changes in atmospheric CO2 concentration have played a central role in algal and
plant adaptation and evolution. The commercially important red algal genus, Pyropia …

[HTML][HTML] A positive correlation between GC content and growth temperature in prokaryotes

EZ Hu, XR Lan, ZL Liu, J Gao, DK Niu - BMC genomics, 2022 - Springer
Background GC pairs are generally more stable than AT pairs; GC-rich genomes were
proposed to be more adapted to high temperatures than AT-rich genomes. Previous studies …

Evolutionary determinants of genome-wide nucleotide composition

H Long, W Sung, S Kucukyildirim, E Williams… - Nature ecology & …, 2018 - nature.com
One of the long-standing mysteries of evolutionary genomics is the source of the wide
phylogenetic diversity in genome nucleotide composition (G+ C versus A+ T), which must be …

[HTML][HTML] Rokubacteria: genomic giants among the uncultured bacterial phyla

ED Becraft, T Woyke, J Jarett, N Ivanova… - Frontiers in …, 2017 - frontiersin.org
Recent advances in single-cell genomic and metagenomic techniques have facilitated the
discovery of numerous previously unknown, deep branches of the tree of life that lack …