Electronic structure modeling of metal–organic frameworks

JL Mancuso, AM Mroz, KN Le, CH Hendon - Chemical reviews, 2020 - ACS Publications
Owing to their molecular building blocks, yet highly crystalline nature, metal–organic
frameworks (MOFs) sit at the interface between molecule and material. Their diverse …

[HTML][HTML] The ONIOM method and its applications

LW Chung, WMC Sameera, R Ramozzi… - Chemical …, 2015 - ACS Publications
The fields of theoretical and computational chemistry have come a long way since their
inception in the mid-20th century. Fifty years ago, only rudimentary approximations for very …

Fragmentation methods: A route to accurate calculations on large systems

MS Gordon, DG Fedorov, SR Pruitt… - Chemical …, 2012 - ACS Publications
Theoretical chemists have always strived to perform quantum mechanics (QM) calculations
on larger and larger molecules and molecular systems, as well as condensed phase …

The Amber biomolecular simulation programs

DA Case, TE Cheatham III, T Darden… - Journal of …, 2005 - Wiley Online Library
We describe the development, current features, and some directions for future development
of the Amber package of computer programs. This package evolved from a program that was …

CHARMM: the biomolecular simulation program

BR Brooks, CL Brooks III… - Journal of …, 2009 - Wiley Online Library
Abstract CHARMM (Chemistry at HARvard Molecular Mechanics) is a highly versatile and
widely used molecular simulation program. It has been developed over the last three …

QM/MM methods for biomolecular systems

HM Senn, W Thiel - Angewandte Chemie International Edition, 2009 - Wiley Online Library
Two are better than one: Quantum mechanics/molecular mechanics (QM/MM) methods are
the state‐of‐the‐art computational technique for treating reactive and other “electronic” …

[图书][B] Essentials of computational chemistry: theories and models

CJ Cramer - 2013 - books.google.com
Essentials of Computational Chemistry provides a balanced introduction to this dynamic
subject. Suitable for both experimentalists and theorists, a wide range of samples and …

Colloquium: Modeling friction: From nanoscale to mesoscale

A Vanossi, N Manini, M Urbakh, S Zapperi… - Reviews of Modern Physics, 2013 - APS
The physics of sliding friction is gaining impulse from nanoscale and mesoscale
experiments, simulations, and theoretical modeling. This Colloquium reviews some recent …

P450 Enzymes: Their Structure, Reactivity, and Selectivity Modeled by QM/MM Calculations

S Shaik, S Cohen, Y Wang, H Chen, D Kumar… - Chemical …, 2010 - ACS Publications
The introduction of oxygen into biochemical processes has brought about an evolutionary
leap in the history of life, whereby many organisms have evolved to use oxygen as part of …

Integrated modeling program, applied chemical theory (IMPACT)

JL Banks, HS Beard, Y Cao, AE Cho… - Journal of …, 2005 - Wiley Online Library
We provide an overview of the IMPACT molecular mechanics program with an emphasis on
recent developments and a description of its current functionality. With respect to core …