The use of next generation sequencing for improving food safety: Translation into practice
B Jagadeesan, P Gerner-Smidt, MW Allard, S Leuillet… - Food …, 2019 - Elsevier
Abstract Next Generation Sequencing (NGS) combined with powerful bioinformatic
approaches are revolutionising food microbiology. Whole genome sequencing (WGS) of …
approaches are revolutionising food microbiology. Whole genome sequencing (WGS) of …
Metagenomics insights into food fermentations
This review describes the recent advances in the study of food microbial ecology, with a
focus on food fermentations. High‐throughput sequencing (HTS) technologies have been …
focus on food fermentations. High‐throughput sequencing (HTS) technologies have been …
Microbial interactions within the cheese ecosystem and their application to improve quality and safety
The cheese microbiota comprises a consortium of prokaryotic, eukaryotic and viral
populations, among which lactic acid bacteria (LAB) are majority components with a …
populations, among which lactic acid bacteria (LAB) are majority components with a …
Facility-specific “house” microbiome drives microbial landscapes of artisan cheesemaking plants
NA Bokulich, DA Mills - Applied and environmental microbiology, 2013 - Am Soc Microbiol
Cheese fermentations involve the growth of complex microbial consortia, which often
originate in the processing environment and drive the development of regional product …
originate in the processing environment and drive the development of regional product …
Recent and emerging innovations in Salmonella detection: a food and environmental perspective
RL Bell, KG Jarvis, AR Ottesen… - Microbial …, 2016 - Wiley Online Library
Salmonella is a diverse genus of Gram‐negative bacilli and a major foodborne pathogen
responsible for more than a million illnesses annually in the United States alone. Rapid …
responsible for more than a million illnesses annually in the United States alone. Rapid …
Impact of next generation sequencing techniques in food microbiology
Understanding the Maxam-Gilbert and Sanger sequencing as the first generation, in recent
years there has been an explosion of newly-developed sequencing strategies, which are …
years there has been an explosion of newly-developed sequencing strategies, which are …
Sequencing of the cheese microbiome and its relevance to industry
BR Yeluri Jonnala, PLH McSweeney… - Frontiers in …, 2018 - frontiersin.org
The microbiota of cheese plays a key role in determining its organoleptic and other physico-
chemical properties. It is essential to understand the various contributions, positive or …
chemical properties. It is essential to understand the various contributions, positive or …
Dynamics and diversity of microbial community succession during fermentation of Suan yu, a Chinese traditional fermented fish, determined by high throughput …
The main goal of this study was to investigate the dynamics, diversity and succession of
microbial community present during the preparation of Suan yu (fermented fish), with and …
microbial community present during the preparation of Suan yu (fermented fish), with and …
Recent past, present, and future of the food microbiome
Sequencing technologies have deeply changed our approach to the study of food microbial
communities. This review describes recent exploitations of high-throughput sequencing …
communities. This review describes recent exploitations of high-throughput sequencing …
Metagenomic insights into the dynamics of microbial communities in food
G Kergourlay, B Taminiau, G Daube… - International journal of …, 2015 - Elsevier
Metagenomics has proven to be a powerful tool in exploring a large diversity of natural
environments such as air, soil, water, and plants, as well as various human microbiota (eg …
environments such as air, soil, water, and plants, as well as various human microbiota (eg …