Mass spectrometry-based protein footprinting for higher-order structure analysis: fundamentals and applications

XR Liu, MM Zhang, ML Gross - Chemical reviews, 2020 - ACS Publications
Proteins adopt different higher-order structures (HOS) to enable their unique biological
functions. Understanding the complexities of protein higher-order structures and dynamics …

Effects of ionizing radiation on biological molecules—mechanisms of damage and emerging methods of detection

JA Reisz, N Bansal, J Qian, W Zhao… - Antioxidants & redox …, 2014 - liebertpub.com
Significance: The detrimental effects of ionizing radiation (IR) involve a highly orchestrated
series of events that are amplified by endogenous signaling and culminating in oxidative …

Hydroxyl radical protein footprinting: a mass spectrometry-based structural method for studying the higher order structure of proteins

A McKenzie-Coe, NS Montes, LM Jones - Chemical reviews, 2021 - ACS Publications
Hydroxyl radical protein footprinting (HRPF) coupled to mass spectrometry has been
successfully used to investigate a plethora of protein-related questions. The method, which …

Fenton chemistry: an introduction

P Wardman, LP Candeias - Radiation research, 1996 - meridian.allenpress.com
In 1876, Fenton described a colored product obtained on mixing tartaric acid with hydrogen
peroxide and a low concentration of a ferrous salt. Full papers in 1894 and 1896 showed the …

Oxidative strand scission of nucleic acids: routes initiated by hydrogen abstraction from the sugar moiety

WK Pogozelski, TD Tullius - Chemical reviews, 1998 - ACS Publications
Oxidants with free-radical character are wellknown instigators of DNA and RNA damage.
The group includes certain activated antibiotics, metal complexes, redox-active …

Hydroxyl radical-mediated modification of proteins as probes for structural proteomics

G Xu, MR Chance - Chemical reviews, 2007 - ACS Publications
“Footprinting” refers to assays that examine ligand binding and conformational changes by
determining the solvent accessibility of the backbone, bases, or side chain structures of …

Toward the development of metal-based synthetic nucleases and peptidases: a rationale and progress report in applying the principles of coordination chemistry

EL Hegg, JN Burstyn - Coordination Chemistry Reviews, 1998 - Elsevier
Recently there has been great interest in designing small metal complexes which are
capable of catalytically hydrolyzing deoxyribonucleic acid (DNA), ribonucleic acid (RNA) …

DNA and RNA cleavage by metal complexes

G Pratviel, J Bernadou, B Meunier - Advances in Inorganic Chemistry, 1998 - Elsevier
Publisher Summary This chapter discusses DNA and RNA cleavage by metal complexes.
DNA and RNA cleavage, a very active field of research, has been developed in two main …

Oxidative damage to DNA: formation, measurement, and biological significance

J Cadet, M Berger, T Douki, JL Ravanat - … of Reactive Oxygens, NO, CO, II, 2005 - Springer
Deoxyribonucleic acid (DNA) appears to be a critical cellular target for the biological effects
(cellular lethality, mutagenesis, carcinogenesis, and ageing) of oxidation processes …

Design of artificial metallonucleases with oxidative mechanism

Q Jiang, N Xiao, P Shi, Y Zhu, Z Guo - Coordination Chemistry Reviews, 2007 - Elsevier
The rational design of artificial metallonucleases capable of cleaving DNA in a controllable
manner is highly desired due to their potential application in biology and medicine. This …