Highway or byway: the metabolic role of the GABA shunt in plants
Much of the recent work on the γ-aminobutyrate (GABA) shunt in plants has concentrated on
stress/pest-associated and signalling roles. However, fifty years after the structural …
stress/pest-associated and signalling roles. However, fifty years after the structural …
Pyrimidine and purine biosynthesis and degradation in plants
Nucleotide metabolism operates in all living organisms, embodies an evolutionarily ancient
and indispensable complex of metabolic pathways and is of utmost importance for plant …
and indispensable complex of metabolic pathways and is of utmost importance for plant …
ATTED-II v11: a plant gene coexpression database using a sample balancing technique by subagging of principal components
T Obayashi, H Hibara, Y Kagaya, Y Aoki… - Plant and Cell …, 2022 - academic.oup.com
Abstract ATTED-II (https://atted. jp) is a gene coexpression database for nine plant species
based on publicly available RNAseq and microarray data. One of the challenges in …
based on publicly available RNAseq and microarray data. One of the challenges in …
Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis
Gene transcripts with invariant abundance during development and in the face of
environmental stimuli are essential reference points for accurate gene expression analyses …
environmental stimuli are essential reference points for accurate gene expression analyses …
GMD@ CSB. DB: the Golm metabolome database
Metabolomics, in particular gas chromatography–mass spectrometry (GC–MS) based
metabolite profiling of biological extracts, is rapidly becoming one of the cornerstones of …
metabolite profiling of biological extracts, is rapidly becoming one of the cornerstones of …
[图书][B] Analysis of biological networks
BH Junker, F Schreiber - 2008 - Wiley Online Library
Analysis of biological networks ANALYSIS OF BIOLOGICAL NETWORKS Page 2
ANALYSIS OF BIOLOGICAL NETWORKS EDITED BY BJO RN H. JUNKER and FALK …
ANALYSIS OF BIOLOGICAL NETWORKS EDITED BY BJO RN H. JUNKER and FALK …
Co‐expression tools for plant biology: opportunities for hypothesis generation and caveats
Gene co‐expression analysis has emerged in the past 5 years as a powerful tool for gene
function prediction. In essence, co‐expression analysis asks the question 'what are the …
function prediction. In essence, co‐expression analysis asks the question 'what are the …
Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of coresponding genes, and comparison with known responses
B Usadel, A Nagel, O Thimm, H Redestig… - Plant …, 2005 - academic.oup.com
MapMan is a user-driven tool that displays large genomics datasets onto diagrams of
metabolic pathways or other processes. Here, we present new developments, including …
metabolic pathways or other processes. Here, we present new developments, including …
Arabidopsis and primary photosynthetic metabolism–more than the icing on the cake
Historically speaking, Arabidopsis was not the plant of choice for investigating
photosynthesis, with physiologists and biochemists favouring other species such as …
photosynthesis, with physiologists and biochemists favouring other species such as …
Plastidial Thioredoxin z Interacts with Two Fructokinase-Like Proteins in a Thiol-Dependent Manner: Evidence for an Essential Role in Chloroplast Development in Arabidopsis …
B Arsova, U Hoja, M Wimmelbacher, E Greiner… - The Plant …, 2010 - academic.oup.com
Here, we characterize a plastidial thioredoxin (TRX) isoform from Arabidopsis thaliana that
defines a previously unknown branch of plastidial TRXs lying between x-and y-type TRXs …
defines a previously unknown branch of plastidial TRXs lying between x-and y-type TRXs …