The impact of fossil stratigraphic ranges on tip‐calibration, and the accuracy and precision of divergence time estimates

HP Püschel, JE O'Reilly, D Pisani… - …, 2020 - Wiley Online Library
The molecular clock provides the only viable means of establishing realistic evolutionary
timescales but it remains unclear how best to calibrate divergence time analyses …

[图书][B] The species problem: A conceptual history

IY Pavlinov - 2023 - taylorfrancis.com
The general notion of species is one of the most fundamental in biology. But an idea of
species is also one of the most persistent unresolved obsessions of biologists, philosophers …

Opening the species box: What microscopic models of neutral speciation have to say about macroevolution

E Couvert, F Bienvenu, JJ Duchamps, A Erard… - bioRxiv, 2023 - biorxiv.org
In the last two decades, lineage-based models of diversification, where species are viewed
as particles that can divide (speciate) or die (become extinct) at rates depending on some …

[HTML][HTML] The split-and-drift random graph, a null model for speciation

F Bienvenu, F Débarre, A Lambert - Stochastic processes and their …, 2019 - Elsevier
We introduce a new random graph model motivated by biological questions relating to
speciation. This random graph is defined as the stationary distribution of a Markov chain on …

[PDF][PDF] Definition schemas for species categorization and some associated models

A Losonczi - 2023 - researchgate.net
The paper deals with theoretical (mathematical) investigations on the species problem, in
other words we examine the species categorization problem from the modeler's point of …

Random graphs in evolution

F Bienvenu - 2019 - theses.hal.science
This thesis consists of five independent research projects, related either to random graphs or
to evolutionary biology-and most often to both. Chapters 2 and 3 introduce two random …

Species notions that combine phylogenetic trees and phenotypic partitions

A Hoppe, S Türpitz, M Steel - Journal of Mathematical Biology, 2019 - Springer
A recent paper (Manceau and Lambert in bioRxiv, 2017. https://doi. org/10.1101/075580)
developed a novel approach for describing two well-defined notions of 'species' based on a …