[HTML][HTML] Organoid intelligence (OI): the new frontier in biocomputing and intelligence-in-a-dish

L Smirnova, BS Caffo, DH Gracias, Q Huang… - Frontiers in …, 2023 - frontiersin.org
Biological computing (or biocomputing) offers potential advantages over silicon-based
computing in terms of faster decision-making, continuous learning during tasks, and greater …

Spike sorting: new trends and challenges of the era of high-density probes

AP Buccino, S Garcia, P Yger - Progress in Biomedical …, 2022 - iopscience.iop.org
Recording from a large neuronal population of neurons is a crucial challenge to unravel how
information is processed by the brain. In this review, we highlight the recent advances made …

A comparison of neuroelectrophysiology databases

P Subash, A Gray, M Boswell, SL Cohen, R Garner… - Scientific Data, 2023 - nature.com
As data sharing has become more prevalent, three pillars-archives, standards, and analysis
tools-have emerged as critical components in facilitating effective data sharing and …

Functional connectomics spanning multiple areas of mouse visual cortex

MICrONS Consortium, JA Bae, M Baptiste, CA Bishop… - BioRxiv, 2021 - biorxiv.org
To understand the brain we must relate neurons' functional responses to the circuit
architecture that shapes them. Here, we present a large functional connectomics dataset …

Sharing neurophysiology data from the Allen Brain Observatory

SEJ de Vries, JH Siegle, C Koch - Elife, 2023 - elifesciences.org
Nullius in verba ('trust no one'), chosen as the motto of the Royal Society in 1660, implies
that independently verifiable observations—rather than authoritative claims—are a defining …

Neural latents benchmark'21: evaluating latent variable models of neural population activity

F Pei, J Ye, D Zoltowski, A Wu, RH Chowdhury… - arXiv preprint arXiv …, 2021 - arxiv.org
Advances in neural recording present increasing opportunities to study neural activity in
unprecedented detail. Latent variable models (LVMs) are promising tools for analyzing this …

A guide to the BRAIN Initiative Cell Census Network data ecosystem

M Hawrylycz, ME Martone, GA Ascoli, JG Bjaalie… - PLoS …, 2023 - journals.plos.org
Characterizing cellular diversity at different levels of biological organization and across data
modalities is a prerequisite to understanding the function of cell types in the brain …

Single neurons in the human medial temporal lobe flexibly shift representations across spatial and memory tasks

T Donoghue, R Cao, CZ Han, CM Holman… - …, 2023 - Wiley Online Library
Investigations into how individual neurons encode behavioral variables of interest have
revealed specific representations in single neurons, such as place and object cells, as well …

Data management strategy for a collaborative research center

D Mittal, R Mease, T Kuner, H Flor, R Kuner… - GigaScience, 2023 - academic.oup.com
The importance of effective research data management (RDM) strategies to support the
generation of Findable, Accessible, Interoperable, and Reusable (FAIR) neuroscience data …

Is neuroscience FAIR? A call for collaborative standardisation of neuroscience data

JB Poline, DN Kennedy, FT Sommer, GA Ascoli… - Neuroinformatics, 2022 - Springer
In this perspective article, we consider the critical issue of data and other research object
standardisation and, specifically, how international collaboration, and organizations such as …