Decoding the impact of nuclear organization on antigenic variation in parasites
A Barcons-Simon, M Carrington, TN Siegel - Nature Microbiology, 2023 - nature.com
Antigenic variation as a strategy to evade the host adaptive immune response has evolved
in divergent pathogens. Antigenic variation involves restricted, and often mutually exclusive …
in divergent pathogens. Antigenic variation involves restricted, and often mutually exclusive …
ApiAP2 transcription factors in apicomplexan parasites
MD Jeninga, JE Quinn, M Petter - Pathogens, 2019 - mdpi.com
Apicomplexan parasites are protozoan organisms that are characterised by complex life
cycles and they include medically important species, such as the malaria parasite …
cycles and they include medically important species, such as the malaria parasite …
Single-nucleotide variants within heart enhancers increase binding affinity and disrupt heart development
GA Jindal, AT Bantle, JJ Solvason, JL Grudzien… - Developmental Cell, 2023 - cell.com
Transcriptional enhancers direct precise gene expression patterns during development and
harbor the majority of variants associated with phenotypic diversity, evolutionary …
harbor the majority of variants associated with phenotypic diversity, evolutionary …
A PPP-type pseudophosphatase is required for the maintenance of basal complex integrity in Plasmodium falciparum
AA Morano, RM Rudlaff, JD Dvorin - Nature Communications, 2023 - nature.com
During its asexual blood stage, P. falciparum replicates via schizogony, wherein dozens of
daughter cells are formed within a single parent. The basal complex, a contractile ring that …
daughter cells are formed within a single parent. The basal complex, a contractile ring that …
A single-cell atlas of Plasmodium falciparum transmission through the mosquito
Malaria parasites have a complex life cycle featuring diverse developmental strategies, each
uniquely adapted to navigate specific host environments. Here we use single-cell …
uniquely adapted to navigate specific host environments. Here we use single-cell …
Extracellular vesicles could be a putative posttranscriptional regulatory mechanism that shapes intracellular RNA levels in Plasmodium falciparum
Plasmodium falciparum secretes extracellular vesicles (Pf EVs) that contain parasite-derived
RNA. However, the significance of the secreted RNA remains unexplored. Here, we …
RNA. However, the significance of the secreted RNA remains unexplored. Here, we …
Systematic identification of wheat spike developmental regulators by integrated multi-omics, transcriptional network, GWAS, and genetic analyses
X Lin, Y Xu, D Wang, Y Yang, X Zhang, X Bie, L Gui… - Molecular Plant, 2024 - cell.com
The spike architecture of wheat plays a crucial role in determining grain number, making it a
key trait for optimization in wheat breeding programs. In this study, we used a multi-omic …
key trait for optimization in wheat breeding programs. In this study, we used a multi-omic …
Characterization of the dual role of Plasmodium falciparum DNA methyltransferase in regulating transcription and translation
AB Lucky, C Wang, X Li, A Chim-Ong… - Nucleic acids …, 2023 - academic.oup.com
DNA modifications are critical in fine-tuning the biological processes in model organisms.
However, the presence of cytosine methylation (5mC) and the function of the putative DNA …
However, the presence of cytosine methylation (5mC) and the function of the putative DNA …
Refining the transcriptome of the human malaria parasite Plasmodium falciparum using amplification-free RNA-seq
Background Plasmodium parasites undergo several major developmental transitions during
their complex lifecycle, which are enabled by precisely ordered gene expression programs …
their complex lifecycle, which are enabled by precisely ordered gene expression programs …
ATAC-seq normalization method can significantly affect differential accessibility analysis and interpretation
Background Chromatin dysregulation is associated with developmental disorders and
cancer. Numerous methods for measuring genome-wide chromatin accessibility have been …
cancer. Numerous methods for measuring genome-wide chromatin accessibility have been …